RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ZFYVE21Q9BQ24 234 aa17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 SELENOSQ9BQE4 189 aa17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 SLC7A5P2Q9GIP4 190 aa17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 AKIRIN1Q9H9L7 192 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 ABCF3Q9NUQ8 709 aa17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 ZNF180Q9UJW8 692 aa17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 SRPK3Q9UPE1 567 aa17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 CACNA1BQ00975 2339 aa17.47■□□□□ 0.39
PDLIM7-209ENST00000503346 FITM1A5D6W6 292 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 C21orf140B9A014 251 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 ANXA5P08758 320 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 MYBL2P10244 700 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 EZRP15311 586 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 F8A1P23610 371 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 DLSTP36957 453 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 HNMTP50135 292 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 SERPINB9P50453 376 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 CSHL1Q14406 222 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 ZNF385CQ66K41 422 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 FRA10AC1Q70Z53 315 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 TBC1D1Q86TI0 1168 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 GSPT2Q8IYD1 628 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 ZSCAN1Q8NBB4 408 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 UHMK1Q8TAS1 419 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 CT55Q8WUE5 264 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 KIAA1191Q96A73 305 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 PTERQ96BW5 349 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 DPH2Q9BQC3 489 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 HAUS8Q9BT25 410 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 FAM117AQ9C073 453 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 UNKQ9C0B0 810 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 ANKZF1Q9H8Y5 726 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 SNX15Q9NRS6 342 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 TMEM184CQ9NVA4 438 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 CUEDC1Q9NWM3 386 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 IRAK4Q9NWZ3 460 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 IL17BQ9UHF5 180 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 PCDHGA6Q9Y5G7 932 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 IKBKGQ9Y6K9 419 aa17.46■□□□□ 0.39
PDLIM7-209ENST00000503346 A0A087X1B8 175 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 A0A0J9YVX5 310 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 SLU7O95391 586 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 C2P06681 752 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 NPPBP16860 134 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 CNTFP26441 200 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 MSH2P43246 934 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 SERPINB8P50452 374 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 DLG1Q12959 904 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 DNASE1L3Q13609 305 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 GRM7Q14831 915 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 TGFBIQ15582 683 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 CDKL4Q5MAI5 379 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 YOD1Q5VVQ6 348 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 FRMPD2BQ6IN97 320 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 TAOK1Q7L7X3 1001 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 C17orf64Q86WR6 236 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 PROKR1Q8TCW9 393 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 DCAKDQ8WVC6 231 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 MR1Q95460 341 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 ISL2Q96A47 359 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 ALKBH8Q96BT7 664 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 PYCR2Q96C36 320 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 OR4K3Q96R72 315 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 EGFL8Q99944 293 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 NDC1Q9BTX1 674 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 DHRS4Q9BTZ2 278 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 NMRAL1Q9HBL8 299 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 IGSF5Q9NSI5 407 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 KCND3Q9UK17 655 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 ACOT9Q9Y305 439 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 PTPRQQ9UMZ3 2332 aa17.45■□□□□ 0.38
PDLIM7-209ENST00000503346 LOC105369274A0A096LPK9 316 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 LOC102723532A0A0G2JNH3 316 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 ZNF891A8MT65 544 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 POC1B-GALNT4F8VUJ3 575 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 H7BY64 318 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 ALDOAP04075 364 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 LTA4HP09960 611 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 TCN2P20062 427 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 GMPRP36959 345 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 MAGEA12P43365 314 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 ARSFP54793 590 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 VSX2P58304 361 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 OR4D1Q15615 310 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 PTCHD3Q3KNS1 767 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 WASHC2DQ5SRD0 308 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 FAM199XQ6PEV8 388 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 ADCK2Q7Z695 626 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 ISCA2Q86U28 154 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 GPSM1Q86YR5 675 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 KLHDC8AQ8IYD2 350 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 OR4N4Q8N0Y3 316 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 TCAIMQ8N3R3 496 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 ABHD11Q8NFV4 315 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 RHBDF1Q96CC6 855 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 PRAP1Q96NZ9 151 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 GBP5Q96PP8 586 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 OR2A5Q96R48 311 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 GPR87Q9BY21 358 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms