RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 HCRTR1O43613 425 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 FAM155BO75949 473 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 LIFP15018 202 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 TCN2P20062 427 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 HRH2P25021 359 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 RAB10P61026 200 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 ZNF460Q14592 562 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 DEFB110Q30KQ9 67 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 TCTE1Q5JU00 501 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 PRAMEF17Q5VTA0 474 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 ANKRD49Q8WVL7 239 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 RNF31Q96EP0 1072 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 DERL2Q9GZP9 239 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 ATG10Q9H0Y0 220 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 ACSS3Q9H6R3 686 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 CCDC177Q9NQR7 707 aaPredicted RBP13.8□□□□□ -0.2
CLDND1-206ENST00000502299 ABCF3Q9NUQ8 709 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 IRAK4Q9NWZ3 460 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 CTNNAL1Q9UBT7 734 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 KCND3Q9UK17 655 aa13.8□□□□□ -0.2
CLDND1-206ENST00000502299 OR2A25A4D2G3 310 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 H3BMH7 237 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 MEN1O00255 615 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 CDC7O00311 574 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 PHGDHO43175 533 aaKnown RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 ACSL3O95573 720 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 GUCA1CO95843 209 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 CCDC166P0CW27 439 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 AGXTP21549 392 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 CRABP2P29373 138 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 DLSTP36957 453 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 ATP6V0D1P61421 351 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 YBX1P67809 324 aaKnown RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 RELAQ04206 551 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 NAE1Q13564 534 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 EFTUD2Q15029 972 aaKnown RBP eCLIP13.79□□□□□ -0.22e-11■■■□□ 16.6
CLDND1-206ENST00000502299 ZKSCAN8Q15776 578 aaPredicted RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 CAPN13Q6MZZ7 669 aaPredicted RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 FBXO42Q6P3S6 717 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 SBSNQ6UWP8 590 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 RAPH1Q70E73 1250 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 TRMT10CQ7L0Y3 403 aaKnown RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 PTRH1Q86Y79 214 aaKnown RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 EIF1ADQ8N9N8 165 aaKnown RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 SLC38A9Q8NBW4 561 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 MR1Q95460 341 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 FBXL8Q96CD0 374 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 MRRFQ96E11 262 aaKnown RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 SLC45A3Q96JT2 553 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 DPH2Q9BQC3 489 aaPredicted RBP13.79□□□□□ -0.2
CLDND1-206ENST00000502299 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 NDC1Q9BTX1 674 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 GPR87Q9BY21 358 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 TMEM184CQ9NVA4 438 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 SRPK3Q9UPE1 567 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 NBASA2RRP1 2371 aa13.79□□□□□ -0.2
CLDND1-206ENST00000502299 USP9YO00507 2555 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 UTP20O75691 2785 aaKnown RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 DOPEY2Q9Y3R5 2298 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 A0A087WUV0 522 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 A0A0J9YVX5 310 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 C21orf140B9A014 251 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ZSCAN9O15535 394 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 CTSVO60911 334 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 WISP3O95389 354 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ANXA5P08758 320 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 RORAP35398 523 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ARSFP54793 590 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 TBPL1P62380 186 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 RPS15P62841 145 aaKnown RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 CDKL1Q00532 357 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 MC1RQ01726 317 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 GPS2Q13227 327 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 UAP1Q16222 522 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 FAM214AQ32MH5 1076 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 TEX35Q5T0J7 233 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 YOD1Q5VVQ6 348 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 PRAMEF13Q5VWM6 474 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ZNF425Q6IV72 752 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 LCTLQ6UWM7 567 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ZNF517Q6ZMY9 492 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 MBOAT1Q6ZNC8 495 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 FRA10AC1Q70Z53 315 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 CCDC91Q7Z6B0 441 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 DSELQ8IZU8 1212 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ZNF655Q8N720 491 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 LRRN4CLQ8ND94 238 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 OR56A3Q8NH54 315 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ALKBH8Q96BT7 664 aaKnown RBP13.78□□□□□ -0.2
CLDND1-206ENST00000502299 UBXN10Q96LJ8 280 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ZFYVE21Q9BQ24 234 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 SELENOSQ9BQE4 189 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 HAUS8Q9BT25 410 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 SLC6A20Q9NP91 592 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 ENAMQ9NRM1 1142 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 TXLNGQ9NUQ3 528 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 PCMTD2Q9NV79 361 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 CROTQ9UKG9 612 aa13.78□□□□□ -0.2
CLDND1-206ENST00000502299 IKZF3Q9UKT9 509 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms