RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SLC19A2O60779 497 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 PRAMEF2O60811 474 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 GRIA1P42261 906 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 ARF3P61204 181 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-212ENST00000498540 RBPJQ06330 500 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 CDH17Q12864 832 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 FASTKQ14296 549 aaKnown RBP13.96□□□□□ -0.17
TRAF4-212ENST00000498540 C3AR1Q16581 482 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 FASTKD1Q53R41 847 aaKnown RBP13.96□□□□□ -0.17
TRAF4-212ENST00000498540 FBXO42Q6P3S6 717 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 TTC23LQ6PF05 361 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 XKRXQ6PP77 449 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 LINC00523Q86TU6 105 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 DPH7Q9BTV6 452 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 ACAT2Q9BWD1 397 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF700Q9H0M5 742 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 C14orf105Q9NVL8 296 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 MARCH4Q9P2E8 410 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-212ENST00000498540 ZFHX3Q15911 3703 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 SCN2AQ99250 2005 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 A0A0U1RQJ8 604 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 PRMT5O14744 637 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-212ENST00000498540 HEXBP07686 556 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 SLC26A3P40879 764 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 CETN2P41208 172 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 PRAMEP78395 509 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 ZNF33BQ06732 778 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 TESK1Q15569 626 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 SYT16Q17RD7 645 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 HKDC1Q2TB90 917 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 ABHD17BQ5VST6 288 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 ZC3H7AQ8IWR0 971 aaKnown RBP13.95□□□□□ -0.18
TRAF4-212ENST00000498540 TC2NQ8N9U0 490 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 SUN3Q8TAQ9 357 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 SKA2Q8WVK7 121 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-212ENST00000498540 MMABQ96EY8 250 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-212ENST00000498540 TSR3Q9UJK0 312 aaKnown RBP13.95□□□□□ -0.18
TRAF4-212ENST00000498540 RIMKLBQ9ULI2 386 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 RUVBL1Q9Y265 456 aaKnown RBP13.95□□□□□ -0.18
TRAF4-212ENST00000498540 DUSP10Q9Y6W6 482 aa13.95□□□□□ -0.18
TRAF4-212ENST00000498540 MTORP42345 2549 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 PRPF4O43172 522 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■□□□□ 9.2
TRAF4-212ENST00000498540 ADRA1DP25100 572 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 KIR3DL1P43629 444 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 EMP3P54852 163 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 CASP6P55212 293 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 KLF1Q13351 362 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-212ENST00000498540 SPA17Q15506 151 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 PTRHD1Q6GMV3 140 aaKnown RBP13.94□□□□□ -0.18
TRAF4-212ENST00000498540 TMEM205Q6UW68 189 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 NCCRP1Q6ZVX7 275 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-212ENST00000498540 ARHGEF39Q8N4T4 335 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 RAB42Q8N4Z0 105 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 CSNK1A1LQ8N752 337 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 GSDMBQ8TAX9 411 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 SLC35B2Q8TB61 432 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 ADAMTS18Q8TE60 1221 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 MVB12AQ96EY5 273 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 IMMP1LQ96LU5 166 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 TGIF2Q9GZN2 237 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 P2RY12Q9H244 342 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 MKKSQ9NPJ1 570 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-212ENST00000498540 CATSPERZQ9NTU4 200 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 STMN3Q9NZ72 180 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 CDC14AQ9UNH5 594 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 TCAF1Q9Y4C2 921 aa13.94□□□□□ -0.18
TRAF4-212ENST00000498540 A0A0A6YYC8 382 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 IGKV1-8A0A0C4DH67 115 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 TCRBV7S2A1N4TA0A589 114 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 GOLGA6L9A6NEM1 432 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 I3L1I5 382 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 FOXS1O43638 330 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 SUN1O94901 812 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 GAS8O95995 478 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 ANXA5P08758 320 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 ESRRAP11474 423 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 AGAP20933 346 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 CMPK1P30085 196 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 SSTR2P30874 369 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 PPARGP37231 505 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 NAP1L1P55209 391 aaKnown RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 SNRPNP63162 240 aaKnown RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 ZNF766Q5HY98 468 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 AARS2Q5JTZ9 985 aaKnown RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 LRRC8BQ6P9F7 803 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 SUSD1Q6UWL2 747 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 PPP1R21Q6ZMI0 780 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 SHISA5Q8N114 240 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 LRRC57Q8N9N7 239 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 MTFMTQ96DP5 389 aaKnown RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 MAGED4Q96JG8 741 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 PANX3Q96QZ0 392 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 PLCD4Q9BRC7 762 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 TUBB6Q9BUF5 446 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 TSPAN10Q9H1Z9 355 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-212ENST00000498540 ETNK1Q9HBU6 452 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 SPATA7Q9P0W8 599 aa13.93□□□□□ -0.18
TRAF4-212ENST00000498540 MKL2Q9ULH7 1088 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms