RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PCDH1Q08174 1060 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 PPIGQ13427 754 aaKnown RBP eCLIP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 BIRC2Q13490 618 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 DDX39BQ13838 428 aaKnown RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 GRIN2CQ14957 1233 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 NKG7Q16617 165 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 C11orf91Q3C1V1 193 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 ERICH5Q6P6B1 374 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 TMEM220Q6QAJ8 160 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 THAP5Q7Z6K1 395 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 CLVS1Q8IUQ0 354 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 SLC22A15Q8IZD6 547 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 CELF5Q8N6W0 485 aaKnown RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 TERB1Q8NA31 727 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 OR8J2Q8NGG1 315 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 SPPL3Q8TCT6 385 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 ZSWIM3Q96MP5 696 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 MTERF1Q99551 399 aaKnown RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 NPLQ9BXD5 320 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 ZCCHC2Q9C0B9 1178 aaKnown RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 SGK2Q9HBY8 427 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 C3orf18Q9UK00 162 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 RWDD3Q9Y3V2 267 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 ORC6Q9Y5N6 252 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 KCNE2Q9Y6J6 123 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 NOTCH4Q99466 2003 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 MAGEB17A8MXT2 336 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 H3BM21 787 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 CLIC1O00299 241 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 TLL1O43897 1013 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ADH1CP00326 375 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 MYCLP1P12525 358 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 EPCAMP16422 314 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 EEF1B2P24534 225 aaKnown RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 PCSK6P29122 969 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 IMPA1P29218 277 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 PREPP48147 710 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 CCR3P51677 355 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 PNLIPRP1P54315 467 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 UGT8Q16880 541 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 RFX4Q33E94 735 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 SPESP1Q6UW49 350 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 PARS2Q7L3T8 475 aaKnown RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 HIPK1Q86Z02 1210 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 VPS37AQ8NEZ2 397 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 PJA1Q8NG27 643 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 OR56A3Q8NH54 315 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF420Q8TAQ5 688 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ING5Q8WYH8 240 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 REPS1Q96D71 796 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 TOR3AQ9H497 397 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 MTG2Q9H4K7 406 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 IFT80Q9P2H3 777 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 DPP7Q9UHL4 492 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 MRPS23Q9Y3D9 190 aaKnown RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 MAGED1Q9Y5V3 778 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 HCFC2Q9Y5Z7 792 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 SLC16A8O95907 504 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 CYP17A1P05093 508 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 CISD3P0C7P0 127 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 CEBPBP17676 345 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 BDKRB1P46663 353 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ARHGDIAP52565 204 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ELP6Q0PNE2 266 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 CBX2Q14781 532 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 SPIN4Q56A73 249 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 RBM48Q5RL73 367 aaKnown RBP10.72□□□□□ -0.69
CMSS1-208ENST00000496116 CES5AQ6NT32 575 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF621Q6ZSS3 439 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 C10orf111Q8N326 155 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 RNF175Q8N4F7 328 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF366Q8N895 744 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 OR7A2PQ8NGA2 310 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 ISOC1Q96CN7 298 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 DTD2Q96FN9 168 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 PKP4Q99569 1192 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 TUBA1CQ9BQE3 449 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 AASDHPPTQ9NRN7 309 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 FAM118AQ9NWS6 357 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 RPS6KA6Q9UK32 745 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 UTS2RQ9UKP6 389 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 SLC27A6Q9Y2P4 619 aa10.72□□□□□ -0.69
CMSS1-208ENST00000496116 PDE4DIPQ5VU43 2346 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 HOXC11O43248 304 aaPredicted RBP10.71□□□□□ -0.69
CMSS1-208ENST00000496116 NOBOXO60393 691 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 ENGP17813 658 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 GPX2P18283 190 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 PBLDP30039 288 aaPredicted RBP10.71□□□□□ -0.69
CMSS1-208ENST00000496116 DCTP40126 519 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 MAGEA2P43356 314 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 IST1P53990 364 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 RAD23AP54725 363 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 NUP107P57740 925 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 LAPTM5Q13571 262 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 LRRC23Q53EV4 343 aaPredicted RBP10.71□□□□□ -0.69
CMSS1-208ENST00000496116 PRRC2BQ5JSZ5 2229 aaKnown RBP10.71□□□□□ -0.69
CMSS1-208ENST00000496116 BROXQ5VW32 411 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 CAPN13Q6MZZ7 669 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms