RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 FBXO15Q8NCQ5 510 aaPredicted RBP17.53■□□□□ 0.4
SNX8-209ENST00000494722 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.53■□□□□ 0.4
SNX8-209ENST00000494722 KCNJ9Q92806 393 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
SNX8-209ENST00000494722 FAM136AQ96C01 138 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 AGAP4Q96P64 663 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 WDR77Q9BQA1 342 aaPredicted RBP17.53■□□□□ 0.4
SNX8-209ENST00000494722 PLCD4Q9BRC7 762 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 CRB3Q9BUF7 120 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 ACAT2Q9BWD1 397 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 SOX17Q9H6I2 414 aaPredicted RBP17.53■□□□□ 0.4
SNX8-209ENST00000494722 L2HGDHQ9H9P8 463 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 CTSFQ9UBX1 484 aa17.53■□□□□ 0.4
SNX8-209ENST00000494722 TSR3Q9UJK0 312 aaKnown RBP17.53■□□□□ 0.4
SNX8-209ENST00000494722 CES2O00748 559 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 TXNDC9O14530 226 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 FBLP22087 321 aaKnown RBP17.52■□□□□ 0.4
SNX8-209ENST00000494722 CLCN7P51798 805 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 TERF1P54274 439 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 PNLIPRP1P54315 467 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 PRDX1Q06830 199 aaKnown RBP17.52■□□□□ 0.4
SNX8-209ENST00000494722 GARNL3Q5VVW2 1013 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 ANKRD22Q5VYY1 191 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 FBXO42Q6P3S6 717 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 IGFL2Q6UWQ7 119 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 CISD2Q8N5K1 135 aaKnown RBP17.52■□□□□ 0.4
SNX8-209ENST00000494722 METTL27Q8N6F8 245 aaPredicted RBP17.52■□□□□ 0.4
SNX8-209ENST00000494722 STT3BQ8TCJ2 826 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 PPP4R1Q8TF05 950 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 MIEF2Q96C03 454 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 CABS1Q96KC9 395 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 LHPPQ9H008 270 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 EPS8L2Q9H6S3 715 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 AGPAT4Q9NRZ5 378 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 COPG1Q9Y678 874 aaKnown RBP17.52■□□□□ 0.4
SNX8-209ENST00000494722 MAU2Q9Y6X3 613 aa17.52■□□□□ 0.4
SNX8-209ENST00000494722 IGLV3-12A0A075B6K2 115 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 LOC105369274A0A096LPK9 316 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 LOC102723532A0A0G2JNH3 316 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 KRT87PA6NCN2 255 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 PCDH17O14917 1159 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 ZGLP1P0C6A0 271 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 MPC1LP0DKB6 136 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 EZRP15311 586 aaKnown RBP17.51■□□□□ 0.39
SNX8-209ENST00000494722 ABATP80404 500 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 TSTA3Q13630 321 aaPredicted RBP17.51■□□□□ 0.39
SNX8-209ENST00000494722 ELOAQ14241 798 aaKnown RBP17.51■□□□□ 0.39
SNX8-209ENST00000494722 CYP1B1Q16678 543 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 EIF2S3LQ2VIR3 472 aaKnown RBP17.51■□□□□ 0.39
SNX8-209ENST00000494722 PRTGQ2VWP7 1150 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 ICE2Q659A1 982 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 TTC27Q6P3X3 843 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 CCDC137Q6PK04 289 aaKnown RBP17.51■□□□□ 0.39
SNX8-209ENST00000494722 SHISA6Q6ZSJ9 500 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 OR4N4Q8N0Y3 316 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 OR11G2Q8NGC1 345 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 GRK7Q8WTQ7 553 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 RERGQ96A58 199 aaPredicted RBP17.51■□□□□ 0.39
SNX8-209ENST00000494722 SERPINB12Q96P63 405 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 PKP4Q99569 1192 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 EBNA1BP2Q99848 306 aaKnown RBP17.51■□□□□ 0.39
SNX8-209ENST00000494722 ASF1BQ9NVP2 202 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 GALPQ9UBC7 116 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 PCDHGA10Q9Y5H3 936 aa17.51■□□□□ 0.39
SNX8-209ENST00000494722 H0YGG7 62 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 EIF3FO00303 357 aaPredicted RBP17.5■□□□□ 0.39
SNX8-209ENST00000494722 MAP2K7O14733 419 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 ZBTB14O43829 449 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 CBX6O95503 412 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 HPP00738 406 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 ACPPP15309 386 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 COILP38432 576 aaPredicted RBP17.5■□□□□ 0.39
SNX8-209ENST00000494722 GLRBP48167 497 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 ARF3P61204 181 aaPredicted RBP17.5■□□□□ 0.39
SNX8-209ENST00000494722 KLC1Q07866 573 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 MRPL49Q13405 166 aaKnown RBP17.5■□□□□ 0.39
SNX8-209ENST00000494722 DSG2Q14126 1118 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 NR6A1Q15406 480 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 LRRC8EQ6NSJ5 796 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 SUSD1Q6UWL2 747 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 PAQR7Q86WK9 346 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 CREG2Q8IUH2 290 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 TMEM151BQ8IW70 566 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 CSNK1A1LQ8N752 337 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 GABPB2Q8TAK5 448 aaPredicted RBP17.5■□□□□ 0.39
SNX8-209ENST00000494722 PRR7Q8TB68 274 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 ASB11Q8WXH4 323 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 INPP5DQ92835 1189 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 C19orf60Q96EN9 201 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 C10orf90Q96M02 699 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 C14orf105Q9NVL8 296 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 PLEKHB1Q9UF11 243 aaPredicted RBP17.5■□□□□ 0.39
SNX8-209ENST00000494722 TAC3Q9UHF0 121 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 C3orf18Q9UK00 162 aa17.5■□□□□ 0.39
SNX8-209ENST00000494722 GOLGA6L10A0A0M3HER8 536 aa17.49■□□□□ 0.39
SNX8-209ENST00000494722 ZCWPW2A0A1B0GU75 182 aa17.49■□□□□ 0.39
SNX8-209ENST00000494722 MASP2O00187 686 aa17.49■□□□□ 0.39
SNX8-209ENST00000494722 PGRMC1O00264 195 aaKnown RBP17.49■□□□□ 0.39
SNX8-209ENST00000494722 SEMA7AO75326 666 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms