RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SMOQ99835 787 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 TBL1XR1Q9BZK7 514 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ADAP2Q9NPF8 381 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CDC7O00311 574 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 TOR1BO14657 336 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CHP2O43745 196 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 NPPAP01160 153 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ALPIP09923 528 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 GSTM3P21266 225 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 DGKEP52429 567 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.67■□□□□ 0.581e-7■□□□□ 11.1
COL27A1-207ENST00000494090 OR2T5Q6IEZ7 315 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 OR2T29Q8NH02 315 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CCSER2Q9H7U1 834 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 TBC1D17Q9HA65 648 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 TCF7L1Q9HCS4 588 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CHMP1AQ9HD42 196 aaPredicted RBP18.67■□□□□ 0.58
COL27A1-207ENST00000494090 SNX4O95219 450 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 MVKQ03426 396 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CARTPTQ16568 116 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 SLC2A7Q6PXP3 512 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CAND1Q86VP6 1230 aaKnown RBP18.67■□□□□ 0.58
COL27A1-207ENST00000494090 NLGN2Q8NFZ4 835 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 STON2Q8WXE9 905 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ANKRA2Q9H9E1 313 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 MOV10Q9HCE1 1003 aaKnown RBP18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CCDC59Q9P031 241 aaKnown RBP18.67■□□□□ 0.58
COL27A1-207ENST00000494090 LCHNA4D1U4 455 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 FABP12A6NFH5 140 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 TPST2O60704 377 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 DUOXA1Q1HG43 343 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 PMEPA1Q969W9 287 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 MCCC2Q9HCC0 563 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
COL27A1-207ENST00000494090 RFPL1O75677 317 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 DGKQP52824 942 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 UFM1P61960 85 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 PITPNAQ00169 270 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 TLR1Q15399 786 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 CHRNA6Q15825 494 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 CCDC54Q8NEL0 328 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 OR10H4Q8NGA5 316 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 CYP2S1Q96SQ9 504 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 UPK3BL1B0FP48 263 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 ANKRD66B4E2M5 251 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 UPK3BL2E5RIL1 263 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 GMFGO60234 142 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 FGF3P11487 239 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-207ENST00000494090 ARCN1P48444 511 aaKnown RBP18.66■□□□□ 0.58
COL27A1-207ENST00000494090 STC1P52823 247 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 PDCD4Q53EL6 469 aaKnown RBP18.66■□□□□ 0.58
COL27A1-207ENST00000494090 GOLGA7Q7Z5G4 137 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 OR4F6Q8NGB9 312 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 KAT2AQ92830 837 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 PYCR2Q96C36 320 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 SLC35A5Q9BS91 424 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 POLR2J2Q9GZM3 115 aaKnown RBP18.66■□□□□ 0.58
COL27A1-207ENST00000494090 IFT46Q9NQC8 304 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 GKN1Q9NS71 199 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 POFUT2Q9Y2G5 429 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 TACSTD2P09758 323 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 ACVR2AP27037 513 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 ARF5P84085 180 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 DSC3Q14574 896 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 UBAP2Q5T6F2 1119 aaKnown RBP18.66■□□□□ 0.58
COL27A1-207ENST00000494090 DNM1P34Q6PK57 102 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 EPYCQ99645 322 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 SNTG1Q9NSN8 517 aa18.66■□□□□ 0.58
COL27A1-207ENST00000494090 PTBP2Q9UKA9 531 aaKnown RBP18.66■□□□□ 0.58
COL27A1-207ENST00000494090 CPSF4LA6NMK7 179 aaKnown RBP18.65■□□□□ 0.58
COL27A1-207ENST00000494090 MLLT3P42568 568 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-207ENST00000494090 CTSOP43234 321 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-207ENST00000494090 TUBA4AP68366 448 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 OLIG2Q13516 323 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 SERINC3Q13530 473 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 LGI4Q8N135 537 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 OR2L5Q8NG80 312 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 POPDC3Q9HBV1 291 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 PAK6Q9NQU5 681 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-207ENST00000494090 TMEM248Q9NWD8 314 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 MANBAO00462 879 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 ORC5O43913 435 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 GANABQ14697 944 aaKnown RBP18.65■□□□□ 0.58
COL27A1-207ENST00000494090 MAPK14Q16539 360 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 FAM182AQ5T1J6 154 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 OR4F3Q6IEY1 312 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 DGAT2Q96PD7 388 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 STOML2Q9UJZ1 356 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 ZNF208O43345 1280 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 ATP1B2P14415 290 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-207ENST00000494090 DSTNP60981 165 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 MYLK3Q32MK0 819 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 LRRC73Q5JTD7 316 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 CLIP4Q8N3C7 705 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 TNFAIP8L1Q8WVP5 186 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 HMGB4Q8WW32 186 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 GEMIN6Q8WXD5 167 aaKnown RBP18.65■□□□□ 0.58
COL27A1-207ENST00000494090 PIGKQ92643 395 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 LGR4Q9BXB1 951 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 AHCYP23526 432 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms