RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 PITX2Q99697 317 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 HERC2P3Q9BVR0 1158 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 LHPPQ9H008 270 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 RACGAP1Q9H0H5 632 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 CRISPLD1Q9H336 500 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 DUSP21Q9H596 190 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 IL26Q9NPH9 171 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 GPRC5BQ9NZH0 403 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 ZNF282Q9UDV7 671 aaPredicted RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 BTNL2Q9UIR0 455 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ZMYM5Q9UJ78 669 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PCDHB14Q9Y5E9 798 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 MRPL42Q9Y6G3 142 aaKnown RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 MYO7AQ13402 2215 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ANAPC1Q9H1A4 1944 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 MAGEB17A8MXT2 336 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 H0Y858 1186 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 GAPDHSO14556 408 aaPredicted RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 AREL1O15033 823 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 RGS10O43665 173 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 SULT1C4O75897 302 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ZBTB11O95625 1053 aaPredicted RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 FGF19O95750 216 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 BPIP17213 487 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 CDH3P22223 829 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 CD40LGP29965 261 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PPM1AP35813 382 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 CSKP41240 450 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PIK3CBP42338 1070 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 MAGEA8P43361 318 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 IL5RAQ01344 420 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ELP6Q0PNE2 266 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 RAB33AQ14088 237 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 SELPLGQ14242 412 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 VMACQ2NL98 169 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 TRIM16LQ309B1 348 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 TJAP1Q5JTD0 557 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 BRAT1Q6PJG6 821 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ENPP6Q6UWR7 440 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 DET1Q7L5Y6 550 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ASZ1Q8WWH4 475 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 MRPS31Q92665 395 aaKnown RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 HLA-CQ95604 372 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 FBXL8Q96CD0 374 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ECHDC3Q96DC8 303 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ALG14Q96F25 216 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PPP1R16AQ96I34 528 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 FAM83CQ9BQN1 747 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 FUNDC2Q9BWH2 189 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ACPTQ9BZG2 426 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 LIN28AQ9H9Z2 209 aaKnown RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 ZFP14Q9HCL3 533 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 TLR9Q9NR96 1032 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 AASDHPPTQ9NRN7 309 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PAK1IP1Q9NWT1 392 aaPredicted RBP11.16□□□□□ -0.62
RFC4-214ENST00000494047 RHBDL2Q9NX52 303 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 SLC25A37Q9NYZ2 338 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 SLC25A13Q9UJS0 675 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 HS3ST2Q9Y278 367 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PADI2Q9Y2J8 665 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 COQ6Q9Y2Z9 468 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 ASB1Q9Y576 335 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 GMPPBQ9Y5P6 360 aa11.16□□□□□ -0.62
RFC4-214ENST00000494047 PLK4O00444 970 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 NOBOXO60393 691 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 MPZL2O60487 215 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 CLIC3O95833 236 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 C9P02748 559 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 URODP06132 367 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 BMP1P13497 986 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 EFNA1P20827 205 aaPredicted RBP11.15□□□□□ -0.63
RFC4-214ENST00000494047 MATN1P21941 496 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 PCMT1P22061 227 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 AOAHP28039 575 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 SHMT2P34897 504 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 HNF1BP35680 557 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 GZMMP51124 257 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 BCAP31P51572 246 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 BMXP51813 675 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 SLC35A2P78381 396 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 SLC7A9P82251 487 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 BNIP3Q12983 259 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 CDK5R2Q13319 367 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 CDKN3Q16667 212 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 ZIK1Q3SY52 487 aaPredicted RBP11.15□□□□□ -0.63
RFC4-214ENST00000494047 TIMM50Q3ZCQ8 353 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 PYCR3Q53H96 274 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 TOR1AIP1Q5JTV8 583 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 TBPL2Q6SJ96 375 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 HTR3DQ70Z44 454 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 CBLL1Q75N03 491 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 SYT12Q8IV01 421 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 MSRB3Q8IXL7 192 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 ZBTB8BQ8NAP8 495 aaPredicted RBP11.15□□□□□ -0.63
RFC4-214ENST00000494047 KLHL23Q8NBE8 558 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 BPIFB6Q8NFQ5 453 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms