RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 LACTB2Q53H82 288 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 CBWD5Q5RIA9 395 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 BEND3Q5T5X7 828 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 FAM160B1Q5W0V3 765 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ATG9BQ674R7 924 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ANKS6Q68DC2 871 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ADNP2Q6IQ32 1131 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 FIGLAQ6QHK4 219 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 GAREM2Q75VX8 874 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ABHD12BQ7Z5M8 362 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ARHGEF19Q8IW93 802 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ELMOD1Q8N336 334 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 LNX2Q8N448 690 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ALLCQ8N6M5 410 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 C1orf52Q8N6N3 182 aaKnown RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 COLGALT1Q8NBJ5 622 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 NUDT10Q8NFP7 164 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OR7D4Q8NG98 312 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OR10J5Q8NHC4 309 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 C9orf43Q8TAL5 461 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 TBC1D15Q8TC07 691 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 GRHL3Q8TE85 626 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OIT3Q8WWZ8 545 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ELMO1Q92556 727 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ST6GALNAC6Q969X2 333 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM143Q96AN5 459 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ESAMQ96AP7 390 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ULK4Q96C45 1275 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OMA1Q96E52 524 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 THOC3Q96J01 351 aaKnown RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF668Q96K58 619 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 CLPTM1LQ96KA5 538 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 FAM84BQ96KN1 310 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 C4orf36Q96KX1 117 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 B3GALT6Q96L58 329 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 PACRGQ96M98 296 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 MBOAT7Q96N66 472 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 CASD1Q96PB1 797 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OLFM1Q99784 485 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 GPA33Q99795 319 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 RTP3Q9BQQ7 232 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 MRPL13Q9BYD1 178 aaKnown RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ROGDIQ9GZN7 287 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OR2AG1Q9H205 316 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 EPC1Q9H2F5 836 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 HIPK2Q9H2X6 1198 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 EPB41L4BQ9H329 900 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 MTG2Q9H4K7 406 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 WDR55Q9H6Y2 383 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ACTR8Q9H981 624 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 VCX3AQ9NNX9 186 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 HEYLQ9NQ87 328 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OSER1Q9NX31 292 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 PLEK2Q9NYT0 353 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 OR6C3Q9NZP0 311 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ADAM22Q9P0K1 906 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 HEY2Q9UBP5 337 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 SCOCQ9UIL1 159 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 MID2Q9UJV3 735 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 ADAM30Q9UKF2 790 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 MGAT4BQ9UQ53 548 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 MRPS33Q9Y291 106 aaKnown RBP4.09□□□□□ -1.75
BRCA1-220ENST00000492859 DHRS7Q9Y394 339 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 NR2E1Q9Y466 385 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 HYOU1Q9Y4L1 999 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 SLC22A7Q9Y694 548 aa4.09□□□□□ -1.75
BRCA1-220ENST00000492859 WDR7Q9Y4E6 1490 aa4.09□□□□□ -1.76
BRCA1-220ENST00000492859 KDM5BQ9UGL1 1544 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 FAM240BA0A1B0GVZ2 78 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 OR5K3A6NET4 321 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 C5orf52A6NGY3 159 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 YDJCA8MPS7 323 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 BCKDKO14874 412 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 TM9SF1O15321 606 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ZSCAN12O43309 604 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MGRN1O60291 552 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 SELENOFO60613 162 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 AVILO75366 819 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ERN1O75460 977 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PRSS23O95084 383 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 DEXIO95424 95 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 F10P00742 488 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 GPIP06744 558 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 CELA2BP08218 269 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 CD63P08962 238 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 OR52Z1P0C646 297 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 EBLN1P0CF75 366 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 G6PDP11413 515 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PSKH1P11801 424 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ITGA4P13612 1032 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 GFAPP14136 432 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 GSPT1P15170 499 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF26P17031 533 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF7P17097 686 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ITGALP20701 1170 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 TACR2P21452 398 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MST1P26927 711 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ACVR2AP27037 513 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PRDX6P30041 224 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms