RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TIAL1Q01085 375 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP39-217ENST00000491659 C2orf54Q08AI8 447 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 MGAT5Q09328 741 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 KLRB1Q12918 225 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 SSPNQ14714 243 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 FASTKD3Q14CZ7 662 aaKnown RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 HECTD2Q5U5R9 776 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 SYT10Q6XYQ8 523 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 ASB18Q6ZVZ8 466 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 MED25Q71SY5 747 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 MRGPREQ86SM8 312 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 PAQR7Q86WK9 346 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 ZBED8Q8IZ13 594 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 METTL27Q8N6F8 245 aaPredicted RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 CCDC138Q96M89 665 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 ERP44Q9BS26 406 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 SLC25A23Q9BV35 468 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 TRIM4Q9C037 500 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 NSMCE4AQ9NXX6 385 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 WHRNQ9P202 907 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 STOX2Q9P2F5 926 aaPredicted RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 ADAMTS6Q9UKP5 1117 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 PCDHGA9Q9Y5G4 932 aaKnown RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 TNRC6AQ8NDV7 1962 aaKnown RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 MDC1Q14676 2089 aaKnown RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 HELZ2Q9BYK8 2649 aaKnown RBP14.42□□□□□ -0.1
USP39-217ENST00000491659 LOC105369274A0A096LPK9 316 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 LOC102723532A0A0G2JNH3 316 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 PEX12O00623 359 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 TP73O15350 636 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 RAD51CO43502 376 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 IGHEP01854 428 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 ALBP02768 609 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 HIST1H2AGP0C0S8 130 aaPredicted RBP14.42□□□□□ -0.1
USP39-217ENST00000491659 HIST1H2ADP20671 130 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 ITGAXP20702 1163 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 CCL11P51671 97 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 IL2P60568 153 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 MUM1Q2TAK8 710 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 PRAMEF13Q5VWM6 474 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 ZNF425Q6IV72 752 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 LRRC56Q8IYG6 542 aaPredicted RBP14.42□□□□□ -0.1
USP39-217ENST00000491659 OR4N4Q8N0Y3 316 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 TEX19Q8NA77 164 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 RERGQ96A58 199 aaPredicted RBP14.42□□□□□ -0.1
USP39-217ENST00000491659 PTERQ96BW5 349 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 CABS1Q96KC9 395 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 HIST1H2AHQ96KK5 128 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 HIST1H2AJQ99878 128 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 H2AFJQ9BTM1 129 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 PCBD2Q9H0N5 130 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 WDR54Q9H977 334 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 PARVBQ9HBI1 364 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 NXT1Q9UKK6 140 aaKnown RBP14.42□□□□□ -0.1
USP39-217ENST00000491659 PDE10AQ9Y233 779 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 VWA7Q9Y334 891 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 PCSK5Q92824 1860 aa14.42□□□□□ -0.1
USP39-217ENST00000491659 IGKV1-8A0A0C4DH67 115 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 H0YGG7 62 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 PYCARD-AS1I3L0S3 204 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 K7EM74 188 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 CNOT3O75175 753 aaKnown RBP14.41□□□□□ -0.1
USP39-217ENST00000491659 ONECUT2O95948 504 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 CCND1P24385 295 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 CASRP41180 1078 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 OR1D4P47884 311 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 ARF3P61204 181 aaPredicted RBP14.41□□□□□ -0.1
USP39-217ENST00000491659 TLE1Q04724 770 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 PRMT9Q6P2P2 845 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 FBXO42Q6P3S6 717 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 OVCH1Q7RTY7 1134 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 STRA8Q7Z7C7 330 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 SLC26A11Q86WA9 606 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 CSNK1A1LQ8N752 337 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 PYROXD1Q8WU10 500 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.41□□□□□ -0.1
USP39-217ENST00000491659 COL26A1Q96A83 441 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 FER1L6-AS2Q96M78 137 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 OLFM1Q99784 485 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 RAB17Q9H0T7 212 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 EPN3Q9H201 632 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 SLC26A1Q9H2B4 701 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 SLC22A11Q9NSA0 550 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 CUEDC1Q9NWM3 386 aaPredicted RBP14.41□□□□□ -0.1
USP39-217ENST00000491659 UTP11Q9Y3A2 253 aaKnown RBP14.41□□□□□ -0.1
USP39-217ENST00000491659 MAU2Q9Y6X3 613 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 ANKRD12Q6UB98 2062 aa14.41□□□□□ -0.1
USP39-217ENST00000491659 FAM95CA0A1B0GW59 222 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 TXNDC9O14530 226 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 EIF3HO15372 352 aaKnown RBP eCLIP14.4□□□□□ -0.1
USP39-217ENST00000491659 PRPF4O43172 522 aaKnown RBP eCLIP14.4□□□□□ -0.1
USP39-217ENST00000491659 SAT1P21673 171 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 HRH2P25021 359 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 EMP3P54852 163 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 AP1S2P56377 157 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 RELAQ04206 551 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 CKAP4Q07065 602 aaKnown RBP14.4□□□□□ -0.1
USP39-217ENST00000491659 ILF2Q12905 390 aaKnown RBP14.4□□□□□ -0.1
USP39-217ENST00000491659 NKG7Q16617 165 aa14.4□□□□□ -0.1
USP39-217ENST00000491659 PHKG1Q16816 387 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms