RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ERGP11308 486 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 MMP11P24347 488 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 COILP38432 576 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 PNLIPRP1P54315 467 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 RRADP55042 308 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 MRPS25P82663 173 aaKnown RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 MEF2AQ02078 507 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 PLOD1Q02809 727 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 GRM7Q14831 915 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 RBBP7Q16576 425 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 PRTGQ2VWP7 1150 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 C4orf17Q53FE4 359 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 HSP90AA5PQ58FG0 334 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 PRAMEF13Q5VWM6 474 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 CCDC137Q6PK04 289 aaKnown RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 LANCL3Q6ZV70 420 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 LRRC56Q8IYG6 542 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 TXLNBQ8N3L3 684 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 RASGEF1CQ8N431 466 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 ARHGEF39Q8N4T4 335 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 SIRT6Q8N6T7 355 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 NAT8LQ8N9F0 302 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 TTC29Q8NA56 475 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 OR9A4Q8NGU2 314 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 GSDMBQ8TAX9 411 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 CD200R1Q8TD46 325 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 SSC4DQ8WTU2 575 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 PSMF1Q92530 271 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 ALKBH8Q96BT7 664 aaKnown RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 CABS1Q96KC9 395 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 SIGLEC10Q96LC7 697 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 FER1L6-AS2Q96M78 137 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 CRB3Q9BUF7 120 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 TSSK1BQ9BXA7 367 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 MRM3Q9HC36 420 aaKnown RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 ZNF304Q9HCX3 659 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 MRPS30Q9NP92 439 aaKnown RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 ATP13A2Q9NQ11 1180 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 IARS2Q9NSE4 1012 aaKnown RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 C20orf96Q9NUD7 363 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 TRMT1Q9NXH9 659 aaKnown RBP8.48□□□□□ -1.05
HDAC3-211ENST00000491581 PCDHGA10Q9Y5H3 936 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 MAD1L1Q9Y6D9 718 aa8.48□□□□□ -1.05
HDAC3-211ENST00000491581 ZNF860A6NHJ4 632 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 E5RI56 91 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 E7ENX8 843 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 H7BY64 318 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 MYO1CO00159 1063 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 SMAPO00193 183 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 E2F3O00716 465 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 MAN1A2O60476 641 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ZNF189O75820 626 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 RPN2P04844 631 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 COX6A1P12074 109 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 OGNP20774 298 aaKnown RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 FBLP22087 321 aaKnown RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 IMPA1P29218 277 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 RPA3P35244 121 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 MAGEA6P43360 314 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ARSFP54793 590 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 CDKN2DP55273 166 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 PMP22Q01453 160 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 TAP2Q03519 686 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 DHX9Q08211 1270 aaKnown RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 PHKG1Q16816 387 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 TUBB8Q3ZCM7 444 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ZC3H12BQ5HYM0 836 aaKnown RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ICE2Q659A1 982 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 FCRLBQ6BAA4 426 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ZNF425Q6IV72 752 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 MRNIPQ6NTE8 343 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 Q6ZS92 163 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 VN1R4Q7Z5H5 301 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ADCK2Q7Z695 626 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 SDCCAG8Q86SQ7 713 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 LURAP1LQ8IV03 231 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 CSNK1A1LQ8N752 337 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 TRIM58Q8NG06 486 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 HMGCLL1Q8TB92 370 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ZCCHC10Q8TBK6 192 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 BRIX1Q8TDN6 353 aaKnown RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 GRHL3Q8TE85 626 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 EEF1AKMT1Q8WVE0 214 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 PEX13Q92968 403 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 FKBP10Q96AY3 582 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 MOCOSQ96EN8 888 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 MMABQ96EY8 250 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 PRAP1Q96NZ9 151 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 OR2A5Q96R48 311 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ZFYVE21Q9BQ24 234 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 DDX47Q9H0S4 455 aaKnown RBP8.47□□□□□ -1.05
HDAC3-211ENST00000491581 ATG10Q9H0Y0 220 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 SPNS1Q9H2V7 528 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 PTGFRNQ9P2B2 879 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 TRPC4Q9UBN4 977 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 C3orf18Q9UK00 162 aa8.47□□□□□ -1.05
HDAC3-211ENST00000491581 SPTA1P02549 2419 aa8.46□□□□□ -1.05
HDAC3-211ENST00000491581 ICE1Q9Y2F5 2266 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms