RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 KRT38O76015 456 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ALDOAP04075 364 aaKnown RBP15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 C2P06681 752 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 KLK3P07288 261 aaPredicted RBP15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 EZRP15311 586 aaKnown RBP15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 HRH2P25021 359 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TYK2P29597 1187 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 RORAP35398 523 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 HNMTP50135 292 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CSRP3P50461 194 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DLG1Q12959 904 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TGFBIQ15582 683 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 OR4D1Q15615 310 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZXDCQ2QGD7 858 aaPredicted RBP15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TCTE1Q5JU00 501 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 INO80CQ6PI98 192 aaPredicted RBP15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 GPSM1Q86YR5 675 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DSELQ8IZU8 1212 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZNF655Q8N720 491 aaPredicted RBP15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PTERQ96BW5 349 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 HAUS8Q9BT25 410 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PRORYQ9H606 182 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NMRAL1Q9HBL8 299 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 IGSF5Q9NSI5 407 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PCMTD2Q9NV79 361 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TMEM184CQ9NVA4 438 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CROTQ9UKG9 612 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 RNF112Q9ULX5 631 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SRPK3Q9UPE1 567 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SH2B3Q9UQQ2 575 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ACOT9Q9Y305 439 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 A0A096LPK6 155 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NCF1BA6NI72 391 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NCF1CA8MVU1 366 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 MEN1O00255 615 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 HAT1O14929 419 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SRPX2O60687 465 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NCF1P14598 390 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TFEBP19484 476 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 WT1P19544 449 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DLSTP36957 453 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 VSX2P58304 361 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 IRF9Q00978 393 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SLC29A2Q14542 456 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ARHGAP40Q5TG30 622 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 FRMPD2BQ6IN97 320 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 RHBDD2Q6NTF9 364 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 FBXO42Q6P3S6 717 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CENPLQ8N0S6 344 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TTC29Q8NA56 475 aaPredicted RBP15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZSCAN1Q8NBB4 408 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CT55Q8WUE5 264 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 KCTD4Q8WVF5 259 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 MR1Q95460 341 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ISL2Q96A47 359 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 RHBDF1Q96CC6 855 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZNF285Q96NJ3 590 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 OR4K3Q96R72 315 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NDC1Q9BTX1 674 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DHRS4Q9BTZ2 278 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 EPB41L4BQ9H329 900 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ALG9Q9H6U8 611 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ENAMQ9NRM1 1142 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TXLNGQ9NUQ3 528 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PCDHGA4Q9Y5G9 962 aa15.59■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 C21orf140B9A014 251 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 H7BY64 318 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TERTO14746 1132 aaKnown RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 S100BP04271 92 aaPredicted RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CDH1P12830 882 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NPPBP16860 134 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TCN2P20062 427 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GCAP28676 217 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MAGEA12P43365 314 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ARSFP54793 590 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 VSNL1P62760 191 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RELAQ04206 551 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 DNASE1L3Q13609 305 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GRM7Q14831 915 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FAM83EQ2M2I3 478 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PTCHD3Q3KNS1 767 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CDKL4Q5MAI5 379 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FAM199XQ6PEV8 388 aaPredicted RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ZNF517Q6ZMY9 492 aaPredicted RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 THOC6Q86W42 341 aaKnown RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TCAIMQ8N3R3 496 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 STAG3L4Q8TBR4 150 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PROKR1Q8TCW9 393 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SNRNP27Q8WVK2 155 aaKnown RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 UBLCP1Q8WVY7 318 aaPredicted RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 EXT2Q93063 718 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NXNL1Q96CM4 212 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SLC45A3Q96JT2 553 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PRAP1Q96NZ9 151 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 VPS11Q9H270 941 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 AKIRIN1Q9H9L7 192 aaPredicted RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LHX6Q9UPM6 363 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 V9GYY5 206 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms