RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 DMC1Q14565 340 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 PTCHD3Q3KNS1 767 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 CEP78Q5JTW2 689 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 ARMC4Q5T2S8 1044 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF621Q6ZSS3 439 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 TUBA1AQ71U36 451 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 STX19Q8N4C7 294 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 GGHQ92820 318 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 MAL2Q969L2 176 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 HSH2DQ96JZ2 352 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 SH3GL1Q99961 368 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 EBPLQ9BY08 206 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 IL1RAPQ9NPH3 570 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 RLIMQ9NVW2 624 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 A8MX80 341 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 SCAMP3O14828 347 aaKnown RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 RGS14O43566 566 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 CPSF4O95639 269 aaKnown RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 NUDT7P0C024 238 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 IFI30P13284 250 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 RHOQP17081 205 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 DNAJA1P31689 397 aaKnown RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 PIK3CBP42338 1070 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF140P52738 457 aaPredicted RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 CDK10Q15131 360 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 SLC39A12Q504Y0 691 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 OVOS1Q6IE37 1185 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF544Q6NX49 715 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF517Q6ZMY9 492 aaPredicted RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 UBQLNLQ8IYU4 475 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 UBASH3BQ8TF42 649 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 CPPED1Q9BRF8 314 aaPredicted RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 BOCQ9BWV1 1114 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 REEP1Q9H902 201 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 CCNB1IP1Q9NPC3 277 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 SERHLQ9NQF3 203 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 RFXANKO14593 260 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 TAPBPO15533 448 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 OTCP00480 354 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 OPN1SWP03999 348 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 IL6P05231 212 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 ODC1P11926 461 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 PBX3P40426 434 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 MRPL19P49406 292 aaKnown RBP13.78□□□□□ -0.2
COL16A1-214ENST00000488128 CXCR4P61073 352 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 MXD1Q05195 221 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 ST3GAL4Q11206 333 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 SBSNQ6UWP8 590 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 TTC9BQ8N6N2 239 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 C1QTNF3Q9BXJ4 246 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 CIPCQ9C0C6 399 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 CLMPQ9H6B4 373 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 WWOXQ9NZC7 414 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 OGDHLQ9ULD0 1010 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 KLHL20Q9Y2M5 609 aa13.78□□□□□ -0.2
COL16A1-214ENST00000488128 XIRP2A4UGR9 3374 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 SCO2O43819 266 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 CPNE3O75131 537 aaKnown RBP13.77□□□□□ -0.2
COL16A1-214ENST00000488128 PRAMEF12O95522 483 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 ADORA3P0DMS8 318 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 HOXB8P17481 243 aaPredicted RBP13.77□□□□□ -0.2
COL16A1-214ENST00000488128 HOXC8P31273 242 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 SERINC3Q13530 473 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 BAK1Q16611 211 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 CST9Q5W186 159 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 AFTPHQ6ULP2 937 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 SLC46A3Q7Z3Q1 461 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 SERPINB11Q96P15 392 aa13.77□□□□□ -0.2
COL16A1-214ENST00000488128 PRDM5Q9NQX1 630 aaPredicted RBP13.77□□□□□ -0.2
COL16A1-214ENST00000488128 PRRC2BQ5JSZ5 2229 aaKnown RBP13.77□□□□□ -0.2
COL16A1-214ENST00000488128 ZSCAN5BA6NJL1 495 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 C2orf81A6NN90 581 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 ADRA2AP08913 450 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 FPR1P21462 350 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 TNFSF8P32971 234 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 OR1E2P47887 323 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 TUFMP49411 452 aaKnown RBP13.77□□□□□ -0.21
COL16A1-214ENST00000488128 RGS6P49758 472 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 GZMMP51124 257 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 GPLD1P80108 840 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 ARHGEF7Q14155 803 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 TSTQ16762 297 aaKnown RBP13.77□□□□□ -0.21
COL16A1-214ENST00000488128 FAM171BQ6P995 826 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 TMEM132CQ8N3T6 1108 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 TEX26Q8N6G2 289 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 FEVQ99581 238 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 CNPPD1Q9BV87 410 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 RPRD1BQ9NQG5 326 aaKnown RBP13.77□□□□□ -0.21
COL16A1-214ENST00000488128 CCDC177Q9NQR7 707 aaPredicted RBP13.77□□□□□ -0.21
COL16A1-214ENST00000488128 TMEM248Q9NWD8 314 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 PPT2Q9UMR5 302 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 ERVH48-1M5A8F1 160 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 CTGFP29279 349 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 RRM2P31350 389 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 UGT2B15P54855 530 aa13.77□□□□□ -0.21
COL16A1-214ENST00000488128 SNRPD2P62316 118 aaKnown RBP13.77□□□□□ -0.21
COL16A1-214ENST00000488128 SEMG2Q02383 582 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms