RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ERLIN2O94905 339 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 PIGNO95427 931 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 WDPCPO95876 746 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 RAB40ALP0C0E4 278 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC192P0DO97 292 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CASTP20810 708 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ACHEP22303 614 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 TCEA1P23193 301 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 PAX7P23759 505 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 PTPN3P26045 913 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 NF2P35240 595 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 TIMP3P35625 211 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ASCL1P50553 236 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 MNAT1P51948 309 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 LIMK1P53667 647 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 GSDMDP57764 484 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 BPIFB3P59826 476 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 PRKCZQ05513 592 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 WASHC5Q12768 1159 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SCARB2Q14108 478 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SLMAPQ14BN4 828 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 HYAL4Q2M3T9 481 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 VWC2Q2TAL6 325 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 DCAF10Q5QP82 559 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ELFN2Q5R3F8 820 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 PET117Q6UWS5 81 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ZBTB49Q6ZSB9 765 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 MFSD6Q6ZSS7 791 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 Q6ZTC4 211 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM47EQ6ZV65 393 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SH2D5Q6ZV89 423 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 METTL23Q86XA0 190 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC50Q8IVM0 306 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 LRRC8AQ8IWT6 810 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CCAR2Q8N163 923 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CARNMT1Q8N4J0 409 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ZNF383Q8NA42 475 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 Q8NFD4 153 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CTCFLQ8NI51 663 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 FGFBP3Q8TAT2 258 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SETD6Q8TBK2 473 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SSMEM1Q8WWF3 244 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ROBO4Q8WZ75 1007 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 HSD17B8Q92506 261 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CABS1Q96KC9 395 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 LINC00615Q96LM1 132 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 C16orf45Q96MC5 204 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 AGAP3Q96P47 875 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 PGLYRP2Q96PD5 576 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 GPATCH1Q9BRR8 931 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 FUT8Q9BYC5 575 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 VPS33BQ9H267 617 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 VIPAS39Q9H9C1 493 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 A4GALTQ9NPC4 353 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC52A3Q9NQ40 469 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SERINC1Q9NRX5 453 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 INTS10Q9NVR2 710 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CHCHD3Q9NX63 227 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 B3GAT1Q9P2W7 334 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 GGA2Q9UJY4 613 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CPSF3Q9UKF6 684 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 MTUS1Q9ULD2 1270 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 C2CD2Q9Y426 696 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ATP6V1DQ9Y5K8 247 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SNX5Q9Y5X3 404 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ITSN2Q9NZM3 1697 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 EIF2AK4Q9P2K8 1649 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 ASXL1Q8IXJ9 1541 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 MED14O60244 1454 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 IQSEC2Q5JU85 1478 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SHANK2Q9UPX8 1470 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 DAPK1P53355 1430 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 MSH6P52701 1360 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 KIF24Q5T7B8 1368 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 PIK3R4Q99570 1358 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 TTC21BQ7Z4L5 1316 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 FEZF1A0PJY2 475 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 PRR23AA6NEV1 266 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 ERVV-2B6SEH9 535 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 CLDN4O14493 209 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 SPRY1O43609 319 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 SHOX2O60902 331 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 RNASEH1O60930 286 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 PRKRAO75569 313 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 SLCO2B1O94956 709 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 ALDH1B1P30837 517 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 HSPA4P34932 840 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 RDXP35241 583 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 CDKN1AP38936 164 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 GP5P40197 560 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 MNDAP41218 407 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 CCR10P46092 362 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 MAPK12P53778 367 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 HNRNPKP61978 463 aaKnown RBP eCLIP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 KCNJ10P78508 379 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 RBPJQ06330 500 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 DRP2Q13474 957 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 TUBB2AQ13885 445 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 PHLDA2Q53GA4 152 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 KLHL26Q53HC5 615 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms