RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 HMGCLP35914 325 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CASP4P49662 377 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MTHFSP49914 203 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 SLC12A3P55017 1021 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 DRG2P55039 364 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 YBEYP58557 167 aaPredicted RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 TAS2R60P59551 318 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 ARF5P84085 180 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 ARHGAP8P85298 464 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 BNC1Q01954 994 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 DSC1Q08554 894 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MED21Q13503 144 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TFDP1Q14186 410 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 DLGAP5Q15398 846 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CAMK4Q16566 473 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TRIM16LQ309B1 348 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 SLC9B1Q4ZJI4 515 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 EPC2Q52LR7 807 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 AWAT1Q58HT5 328 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 RUNDC3AQ59EK9 446 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 BEND3Q5T5X7 828 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PAPD7Q5XG87 772 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 ABLIM2Q6H8Q1 611 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 RPUSD3Q6P087 351 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 SCYL2Q6P3W7 929 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CYP20A1Q6UW02 462 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TRAPPC11Q7Z392 1133 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 R3HCC1LQ7Z5L2 792 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 DSG4Q86SJ6 1040 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 KBTBD6Q86V97 674 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 LRRTM4Q86VH4 590 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PHC2Q8IXK0 858 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 ENTHD1Q8IYW4 607 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CYP4Z2PQ8N1L4 340 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 SLC43A2Q8N370 569 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 GLIS1Q8NBF1 620 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 OR5T2Q8NGG2 359 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MBD3L2Q8NHZ7 208 aaPredicted RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 UBA3Q8TBC4 463 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CPT1BQ92523 772 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CELF1Q92879 486 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 TESCQ96BS2 214 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 HMCESQ96FZ2 354 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PRR11Q96HE9 360 aaPredicted RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 PPP1R36Q96LQ0 422 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CCDC43Q96MW1 224 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 FCRL4Q96PJ5 515 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 BTBD9Q96Q07 612 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 ECSITQ9BQ95 431 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PELOQ9BRX2 385 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 TUBB6Q9BUF5 446 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 STRA6Q9BX79 667 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TMEM120AQ9BXJ8 343 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MMP27Q9H306 513 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PIGUQ9H490 435 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MCCC2Q9HCC0 563 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TMEM8AQ9HCN3 771 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.3□□□□□ -1.56
COPS3-209ENST00000486810 ADPRHL2Q9NX46 363 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TMOD3Q9NYL9 352 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TAS2R1Q9NYW7 299 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 NPAP1Q9NZP6 1156 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 FLRT1Q9NZU1 646 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MGAT4CQ9UBM8 478 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 STEAP1Q9UHE8 339 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TNFSF13BQ9Y275 285 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CPQQ9Y646 472 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 AUP1Q9Y679 476 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 SLC22A7Q9Y694 548 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CEPT1Q9Y6K0 416 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PLA2R1Q13018 1463 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 OVOS2A0A0G2JMS6 1433 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 OVOS2A0A0J9YW53 1432 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PTPRTO14522 1441 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 OVOS2Q6IE36 1432 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 ADGRL3Q9HAR2 1447 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CARMIL3Q8ND23 1372 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 MED23Q9ULK4 1368 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 NAV1Q8NEY1 1877 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 XKRY2A2RUG3 117 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 FAM47DPA6NHR8 397 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 OR6C70A6NIJ9 312 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 SLC15A5A6NIM6 579 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 ZNF729A6NN14 1252 aaPredicted RBP5.29□□□□□ -1.56
COPS3-209ENST00000486810 A8MXQ7 604 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 ABCD4O14678 606 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 SLC31A2O15432 143 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 NUPL2O15504 423 aaKnown RBP5.29□□□□□ -1.56
COPS3-209ENST00000486810 MSI1O43347 362 aaKnown RBP5.29□□□□□ -1.56
COPS3-209ENST00000486810 CHMP2AO43633 222 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 GPRIN2O60269 458 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 SNX3O60493 162 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 FMO6PO60774 539 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 HEXIM1O94992 359 aaKnown RBP5.29□□□□□ -1.56
COPS3-209ENST00000486810 APOA1P02647 267 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 MBPP02686 304 aaPredicted RBP5.29□□□□□ -1.56
COPS3-209ENST00000486810 SERPINA5P05154 406 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 SMIM18P0DKX4 95 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 MLNP12872 115 aa5.29□□□□□ -1.56
COPS3-209ENST00000486810 MST1P26927 711 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms