RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 HIBCHQ6NVY1 386 aaPredicted RBP13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 XKRXQ6PP77 449 aa13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 RIPOR1Q6ZS17 1223 aa13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 CHERPQ8IWX8 916 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 RAD51AP1Q96B01 352 aa13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 NPAS2Q99743 824 aa13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 SUCOQ9UBS9 1254 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 SH3BGRL2Q9UJC5 107 aa13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 ITGB1BP2Q9UKP3 347 aa13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 SLC39A10Q9ULF5 831 aa13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 REXO2Q9Y3B8 237 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-211ENST00000486441 OR5H15A6NDH6 313 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 PRAMEF2O60811 474 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 EIF2S1P05198 315 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 ERGP11308 486 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 COX6B1P14854 86 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 AGAP20933 346 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 FBLP22087 321 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 GBX1Q14549 363 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 FAAH2Q6GMR7 532 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 H3F3CQ6NXT2 135 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 AFTPHQ6ULP2 937 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 SPNS3Q6ZMD2 512 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 Q6ZPB1 254 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 NCCRP1Q6ZVX7 275 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 PAQR7Q86WK9 346 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 CNGA4Q8IV77 575 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 ZC3H7AQ8IWR0 971 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 OR2A5Q96R48 311 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 ZFYVE21Q9BQ24 234 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 ANP32EQ9BTT0 268 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 DPH7Q9BTV6 452 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 ETNK1Q9HBU6 452 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 STMN3Q9NZ72 180 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 TRPC4Q9UBN4 977 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 TINAGQ9UJW2 476 aa13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 TTC7AQ9ULT0 858 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 RUVBL1Q9Y265 456 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-211ENST00000486441 PRMT5O14744 637 aaPredicted RBP13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 PSMD3O43242 534 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 ZNHIT1O43257 154 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 SLC19A2O60779 497 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 WFS1O76024 890 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 CRYABP02511 175 aaKnown RBP13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 RPN2P04844 631 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 APOA4P06727 396 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 ADRA1DP25100 572 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 CDH17Q12864 832 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 LRRC8BQ6P9F7 803 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 CNSTQ6PJW8 725 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 OR6P1Q8NGX9 317 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 ALS2CR12Q96Q35 445 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 TREX2Q9BQ50 279 aaPredicted RBP13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 PLCD4Q9BRC7 762 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 LACRTQ9GZZ8 138 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 RIC8BQ9NVN3 520 aa13.52□□□□□ -0.25
SDCCAG3-211ENST00000486441 IGHV3-20A0A0C4DH32 117 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 GRID2IPA4D2P6 1211 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 ADAM10O14672 748 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 P2RX6O15547 441 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 MATN4O95460 622 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 CXCR2P25025 360 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 ST13P50502 369 aaKnown RBP13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 P3H1Q32P28 736 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 KRTAP21-3Q3LHN1 58 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 FASTKD1Q53R41 847 aaKnown RBP13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 CTSL3PQ5NE16 218 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 ZNF425Q6IV72 752 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 MTFR2Q6P444 385 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 PRUNE1Q86TP1 453 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 SIAH3Q8IW03 269 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 MDS2Q8NDY4 140 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 THAP3Q8WTV1 239 aaPredicted RBP13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 LRRC45Q96CN5 670 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 MTFMTQ96DP5 389 aaKnown RBP13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 MVB12AQ96EY5 273 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 BIRC8Q96P09 236 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 ACAT2Q9BWD1 397 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 RAB11FIP5Q9BXF6 653 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 CHRAC1Q9NRG0 131 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 GALPQ9UBC7 116 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 TCAF1Q9Y4C2 921 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 PRRC2AP48634 2157 aaKnown RBP13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 INTS1Q8N201 2190 aaKnown RBP13.51□□□□□ -0.25
SDCCAG3-211ENST00000486441 A0A0A6YYC8 382 aaPredicted RBP13.5□□□□□ -0.25
SDCCAG3-211ENST00000486441 OR2W5A6NFC9 320 aa13.5□□□□□ -0.25
SDCCAG3-211ENST00000486441 I3L1I5 382 aaPredicted RBP13.5□□□□□ -0.25
SDCCAG3-211ENST00000486441 MAN1A2O60476 641 aa13.5□□□□□ -0.25
SDCCAG3-211ENST00000486441 ZNF189O75820 626 aaPredicted RBP13.5□□□□□ -0.25
SDCCAG3-211ENST00000486441 HEXBP07686 556 aa13.5□□□□□ -0.25
SDCCAG3-211ENST00000486441 TPM1P09493 284 aa13.5□□□□□ -0.25
SDCCAG3-211ENST00000486441 MAT1AQ00266 395 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms