RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SCMH1Q96GD3 660 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 CABS1Q96KC9 395 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 NPAS2Q99743 824 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 VKORC1Q9BQB6 163 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 HEMGNQ9BXL5 484 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 CXXC4Q9H2H0 198 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 PIH1D1Q9NWS0 290 aaKnown RBP10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 TEKT2Q9UIF3 430 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 ASB1Q9Y576 335 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 KLK4Q9Y5K2 254 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 VPS13CQ709C8 3753 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 CCDC162PA2VCL2 907 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 H0YGG7 62 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 QSOX1O00391 747 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 SPOPO43791 374 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 FAM155BO75949 473 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 MLYCDO95822 493 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 OR56A5P0C7T3 313 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 ICAM2P13598 275 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 MSNP26038 577 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 EEF1DP29692 281 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 FOXN2P32314 431 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 SLC26A3P40879 764 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 ARF3P61204 181 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 SNRPNP63162 240 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 MAT1AQ00266 395 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 PLOD1Q02809 727 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 TFF3Q07654 80 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 FOXD4Q12950 439 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 FASTKQ14296 549 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 PRPSAP1Q14558 356 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 IQCB1Q15051 598 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 OR1C1Q15619 314 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 HKDC1Q2TB90 917 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 H3F3CQ6NXT2 135 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 FBXO42Q6P3S6 717 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 LANCL3Q6ZV70 420 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 GALNTL5Q7Z4T8 443 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 CRLF3Q8IUI8 442 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 OR2A1Q8NGT9 310 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 MMABQ96EY8 250 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 FAM118BQ9BPY3 351 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 TUBB6Q9BUF5 446 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 UCK2Q9BZX2 261 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 TGIF2Q9GZN2 237 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 CCM2LQ9NUG4 571 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 C14orf105Q9NVL8 296 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 SLC39A10Q9ULF5 831 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 MKL2Q9ULH7 1088 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 CDC14AQ9UNH5 594 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 RUVBL2Q9Y230 463 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 RUVBL1Q9Y265 456 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 HRH3Q9Y5N1 445 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 ABCA4P78363 2273 aa10.29□□□□□ -0.76
SMARCC1-205ENST00000483847 A0A0A6YYC8 382 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 A0A0U1RQJ8 604 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 A0A1W2PPV9 198 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 OR2A25A4D2G3 310 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 TMEM200CA6NKL6 621 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 FAM90A27PA6NNH2 459 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 IQCF5A8MTL0 148 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 I3L1I5 382 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 FOXS1O43638 330 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 GPC4O75487 556 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 FKBP9O95302 570 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 TSPAN12O95859 305 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 RPN2P04844 631 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 C8orf89P0DMQ9 161 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 ERVK-10P10266 1014 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 PTGER1P34995 402 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 SLC1A1P43005 524 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 BDKRB1P46663 353 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 AP2B1P63010 937 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 BTBD16Q32M84 506 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 UNC5DQ6UXZ4 953 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 CLEC17AQ6ZS10 378 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 CEP128Q6ZU80 1094 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 BBS12Q6ZW61 710 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 RHOT2Q8IXI1 618 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 DMRTC2Q8IXT2 367 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 GHDCQ8N2G8 530 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 ZNF354BQ96LW1 612 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 FOXC2Q99958 501 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 ZFYVE21Q9BQ24 234 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 ZNF559Q9BR84 538 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 UTP23Q9BRU9 249 aaKnown RBP10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 DPH7Q9BTV6 452 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 LIME1Q9H400 295 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 MKKSQ9NPJ1 570 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 DLL4Q9NR61 685 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 SPTLC3Q9NUV7 552 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 COQ3Q9NZJ6 369 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 NFS1Q9Y697 457 aa10.28□□□□□ -0.76
SMARCC1-205ENST00000483847 OR2W5A6NFC9 320 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 MROH6A6NGR9 719 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 APOC4-APOC2K7ER74 178 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 PRRG2O14669 202 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 PRPF4O43172 522 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 PSTPIP1O43586 416 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms