RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 KLC1Q07866 573 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 GPR17Q13304 367 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 ITGA7Q13683 1181 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 PHKG1Q16816 387 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 UGP2Q16851 508 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 UGT3A2Q3SY77 523 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 C9orf50Q5SZB4 431 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 CYP4A22Q5TCH4 519 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 ARHGEF16Q5VV41 709 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 ARMC3Q5W041 872 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 MOXD1Q6UVY6 613 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 ENPP7Q6UWV6 458 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 MFSD6Q6ZSS7 791 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 SH2D5Q6ZV89 423 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 MARK2Q7KZI7 788 aaKnown RBP3.48□□□□□ -1.85
CBX3-207ENST00000481300 SPATA21Q7Z572 469 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 RTN4RL2Q86UN3 420 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 LGI2Q8N0V4 545 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 EID3Q8N140 333 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 NDUFAF2Q8N183 169 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 OR4K1Q8NGD4 311 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 DNASE2BQ8WZ79 361 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 CDK19Q9BWU1 502 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 FZD8Q9H461 694 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 PANK3Q9H999 370 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 SDR39U1Q9NRG7 319 aaPredicted RBP3.48□□□□□ -1.85
CBX3-207ENST00000481300 POLLQ9UGP5 575 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 SNX7Q9UNH6 387 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 KCNJ14Q9UNX9 436 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 C2CD2Q9Y426 696 aa3.48□□□□□ -1.85
CBX3-207ENST00000481300 ADAMTS13Q76LX8 1427 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 ZC3H13Q5T200 1668 aaKnown RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 A0A087WYN8 130 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 A0A1W2PRQ8 180 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 ENO4A6NNW6 628 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 ARPC2O15144 300 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 RPS6KA5O75582 802 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 LUC7L3O95232 432 aaKnown RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 CSN3P07498 182 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 PDGFRAP16234 1089 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 EPCAMP16422 314 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 ACAT1P24752 427 aaKnown RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 TIMP3P35625 211 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 HSD17B3P37058 310 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 CDKN1AP38936 164 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 BMXP51813 675 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 MAZP56270 477 aaKnown RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 UBASH3AP57075 661 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 HERV-K104P61576 105 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 CDR2Q01850 454 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 PPARDQ03181 441 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 RRS1Q15050 365 aaKnown RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 NPTX1Q15818 432 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 KRTAP27-1Q3LI81 207 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 KIAA1644Q3SXP7 199 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 SPDYCQ5MJ68 293 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 C20orf194Q5TEA3 1177 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 SHQ1Q6PI26 577 aaKnown RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 SUSD1Q6UWL2 747 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 GALNTL5Q7Z4T8 443 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 KRT77Q7Z794 578 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 MMD2Q8IY49 270 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 MAPKAPK5-AS1Q8N8E1 139 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 KBTBD8Q8NFY9 601 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 OR52N5Q8NH56 324 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 VANGL1Q8TAA9 524 aaPredicted RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 KCNE4Q8WWG9 221 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 PROX1Q92786 737 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 ZNF524Q96C55 264 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 FBXO17Q96EF6 278 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 FAM71F1Q96KD3 344 aaPredicted RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 FAM20AQ96MK3 541 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 FNBP1Q96RU3 617 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 KATNB1Q9BVA0 655 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 TRPV4Q9HBA0 871 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 SIX2Q9NPC8 291 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 SLC52A3Q9NQ40 469 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 SH3GLB2Q9NR46 395 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 FAM207AQ9NSI2 230 aaPredicted RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 INTS10Q9NVR2 710 aaKnown RBP3.47□□□□□ -1.85
CBX3-207ENST00000481300 STUB1Q9UNE7 303 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 WDR83OSQ9Y284 106 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 KNSTRNQ9Y448 316 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 NEXMIFQ5QGS0 1516 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 PIK3C2BO00750 1634 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 MADDQ8WXG6 1647 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 PLEKHH1Q9ULM0 1364 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 SIGLEC1Q9BZZ2 1709 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 ARHGAP23Q9P227 1491 aa3.47□□□□□ -1.85
CBX3-207ENST00000481300 STK36Q9NRP7 1315 aa3.46□□□□□ -1.85
CBX3-207ENST00000481300 NPHP4O75161 1426 aaPredicted RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 TRAV34A0A0B4J273 112 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 IGHV4-61A0A0C4DH41 118 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 C2orf81A6NN90 581 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 CCER2I3L3R5 266 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 ZNF197O14709 1029 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 SLC22A2O15244 555 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 MOCS3O95396 460 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 CLPTM1O96005 669 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 IGHV4-59P01825 116 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms