RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 LDB1Q86U70 411 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 PRSS58Q8IYP2 241 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 KRT222Q8N1A0 295 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 TTC29Q8NA56 475 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 OR6P1Q8NGX9 317 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 OR4L1Q8NH43 312 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 ASZ1Q8WWH4 475 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 TTC1Q99614 292 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 CARD6Q9BX69 1037 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 LIME1Q9H400 295 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 ZNF160Q9HCG1 818 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 ABI3Q9P2A4 366 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 MARCH4Q9P2E8 410 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 SLC39A10Q9ULF5 831 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 RIMKLBQ9ULI2 386 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 MEMO1Q9Y316 297 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 MAU2Q9Y6X3 613 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 ABCA4P78363 2273 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 LOC105369274A0A096LPK9 316 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 TRAV17A0A0B4J275 112 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 LOC102723532A0A0G2JNH3 316 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 HYKKA2RU49 373 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 ERI2A8K979 691 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 BTNL10A8MVZ5 291 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 ZNHIT1O43257 154 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 SUN1O94901 812 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 SLCO2B1O94956 709 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 GAS8O95995 478 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 HPP00738 406 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 PTMSP20962 102 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 PSMB5P28074 263 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 TNFSF10P50591 281 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 ADAM8P78325 824 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 KLC1Q07866 573 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 TMED2Q15363 201 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 CCSMST1Q4G0I0 132 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 FASTKD1Q53R41 847 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 WASHC2DQ5SRD0 308 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 FRMPD2BQ6IN97 320 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 PPP1R21Q6ZMI0 780 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 C3P1Q6ZMU1 363 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 PEX26Q7Z412 305 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 BIVMQ86UB2 503 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 OR4N4Q8N0Y3 316 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 UBL4BQ8N7F7 174 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 ACRBPQ8NEB7 543 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 STT3BQ8TCJ2 826 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 CA5BP1Q8WTZ4 195 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 ATG4AQ8WYN0 398 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 ZUFSPQ96AP4 578 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 SDCCAG3Q96C92 435 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 C8orf44Q96CB5 159 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 VPS50Q96JG6 964 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 MAGED4Q96JG8 741 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 PANX2Q96RD6 677 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 LMF1Q96S06 567 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 MIPEPQ99797 713 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 TSSK1BQ9BXA7 367 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 TRIM5Q9C035 493 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 ETNK1Q9HBU6 452 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 GPAMQ9HCL2 828 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 IL1RAPL1Q9NZN1 696 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 STOX2Q9P2F5 926 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 C3orf18Q9UK00 162 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 PACSIN2Q9UNF0 486 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 KLK4Q9Y5K2 254 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 FAM169AQ9Y6X4 670 aa8.97□□□□□ -0.97
SMARCE1-210ENST00000481231 DYTNA2CJ06 578 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 TARM1B6A8C7 271 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 MAP2K7O14733 419 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 PRMT5O14744 637 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 SRPX2O60687 465 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 USP1O94782 785 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 RASAL1O95294 804 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 FKBP9O95302 570 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 IPO7O95373 1038 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 C1orf105O95561 183 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 FTCDO95954 541 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 IFNB1P01574 187 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 CRYABP02511 175 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 EIF2S1P05198 315 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 ZGLP1P0C6A0 271 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 IGFBP2P18065 325 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 ADRA1DP25100 572 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 SOX11P35716 441 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 BDKRB1P46663 353 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 CARSP49589 748 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 MEOX1P50221 254 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 YBX1P67809 324 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 PRAMEP78395 509 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 FOLH1Q04609 750 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 OCA2Q04671 838 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 FAM214AQ32MH5 1076 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 AARS2Q5JTZ9 985 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 ATG9BQ674R7 924 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 PRMT9Q6P2P2 845 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 CLEC9AQ6UXN8 241 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 RAD9BQ6WBX8 426 aa8.96□□□□□ -0.98
SMARCE1-210ENST00000481231 RNF44Q7L0R7 432 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms