RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GPR42O15529 346 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 USP1O94782 785 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 CBX6O95503 412 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 SYF2O95926 243 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ZGLP1P0C6A0 271 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ACPPP15309 386 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 CARSP49589 748 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ADARP55265 1226 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ARF3P61204 181 aaPredicted RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 CUL1Q13616 776 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 THOC5Q13769 683 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 TTLL9Q3SXZ7 439 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 TTC27Q6P3X3 843 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ADCK2Q7Z695 626 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 CAND1Q86VP6 1230 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 CSNK1A1LQ8N752 337 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 PPFIBP2Q8ND30 876 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 DNAJB14Q8TBM8 379 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 MAGOHBQ96A72 148 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 C8orf44Q96CB5 159 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 C10orf90Q96M02 699 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 CCDC68Q9H2F9 335 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 EPS8L2Q9H6S3 715 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ZNF160Q9HCG1 818 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 FBXO6Q9NRD1 293 aaPredicted RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ENAMQ9NRM1 1142 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 INTS10Q9NVR2 710 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 TAC3Q9UHF0 121 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 C3orf18Q9UK00 162 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 NOVA2Q9UNW9 492 aaKnown RBP14.54□□□□□ -0.08
LIMS3-203ENST00000480744 NTNG1Q9Y2I2 539 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 PPP2R2CQ9Y2T4 447 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 ZGRF1Q86YA3 2104 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-203ENST00000480744 NBPF19A0A087WUL8 3843 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 PSIP1O75475 530 aaKnown RBP14.53□□□□□ -0.08
LIMS3-203ENST00000480744 CCNDBP1O95273 360 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 DDAH2O95865 285 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 ERGP11308 486 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 MAGEA6P43360 314 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 PNLIPRP1P54315 467 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 CTBP1Q13363 440 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 VWA2Q5GFL6 755 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 ICE2Q659A1 982 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 FBXO42Q6P3S6 717 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 LINC00696Q6ZRV3 163 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 PAQR7Q86WK9 346 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 SPNS2Q8IVW8 549 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 DENND6AQ8IWF6 608 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 REXO1L1PQ8IX06 675 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 PPP4R1Q8TF05 950 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 SLC30A3Q99726 388 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 PLCD4Q9BRC7 762 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 AGPAT4Q9NRZ5 378 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 TRPC4Q9UBN4 977 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 ERRFI1Q9UJM3 462 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-203ENST00000480744 CDC14AQ9UNH5 594 aa14.53□□□□□ -0.08
LIMS3-203ENST00000480744 RUVBL1Q9Y265 456 aaKnown RBP14.53□□□□□ -0.08
LIMS3-203ENST00000480744 FAM237BA0A1B0GVD1 139 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 SDR42E2A6NKP2 422 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 ZNF839A8K0R7 811 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 SMAPO00193 183 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 NRDCO43847 1150 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 HPP00738 406 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 UQCRHP07919 91 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 CLCN7P51798 805 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 EEF1A2Q05639 463 aaKnown RBP14.52□□□□□ -0.09
LIMS3-203ENST00000480744 Q0VFX4 171 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 CDC16Q13042 620 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 ARHGAP19Q14CB8 494 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 HKDC1Q2TB90 917 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 PRTGQ2VWP7 1150 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 CRB2Q5IJ48 1285 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 THEMIS2Q5TEJ8 643 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 ARMC3Q5W041 872 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 FAAH2Q6GMR7 532 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 GIMAP7Q8NHV1 300 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 RERGQ96A58 199 aaPredicted RBP14.52□□□□□ -0.09
LIMS3-203ENST00000480744 MMABQ96EY8 250 aaPredicted RBP14.52□□□□□ -0.09
LIMS3-203ENST00000480744 MS4A14Q96JA4 679 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 SYNPO2LQ9H987 977 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 XAB2Q9HCS7 855 aaKnown RBP14.52□□□□□ -0.09
LIMS3-203ENST00000480744 C20orf96Q9NUD7 363 aaPredicted RBP14.52□□□□□ -0.09
LIMS3-203ENST00000480744 UTP6Q9NYH9 597 aaKnown RBP14.52□□□□□ -0.09
LIMS3-203ENST00000480744 PCYOX1Q9UHG3 505 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 MAD1L1Q9Y6D9 718 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 SCN3AQ9NY46 2000 aa14.52□□□□□ -0.09
LIMS3-203ENST00000480744 NSG1A0A0A6YYJ2 146 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 IGKV1-8A0A0C4DH67 115 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 MAGEB16A2A368 324 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 PRPF4O43172 522 aaKnown RBP eCLIP14.51□□□□□ -0.09
LIMS3-203ENST00000480744 KIF5CO60282 957 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 PHF2O75151 1096 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 SLC16A8O95907 504 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 ANXA5P08758 320 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 MLNP12872 115 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 CXCR2P25025 360 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 HSD17B2P37059 387 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 SLC1A2P43004 574 aa14.51□□□□□ -0.09
LIMS3-203ENST00000480744 EMP2P54851 167 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms