RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 FOXS1O43638 330 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 MATN4O95460 622 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 EIF2S1P05198 315 aaKnown RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 ITGAMP11215 1152 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 HTR1EP28566 365 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 TTPAP49638 278 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 EMP2P54851 167 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 ARF3P61204 181 aaPredicted RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 SNRPNP63162 240 aaKnown RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 PRAMEP78395 509 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 SRSF11Q05519 484 aaKnown RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 EEF1A2Q05639 463 aaKnown RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 TMED2Q15363 201 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.14□□□□□ -0.47
TDP2-204ENST00000478507 AARS2Q5JTZ9 985 aaKnown RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 CNSTQ6PJW8 725 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 TMEM205Q6UW68 189 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 TMEM207Q6UWW9 146 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 RPTNQ6XPR3 784 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 MRGPRGQ86SM5 289 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 ZNF295-AS1Q8N0V1 137 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 DNAJB8Q8NHS0 232 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 ATG4AQ8WYN0 398 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 IMMP1LQ96LU5 166 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 PLCD4Q9BRC7 762 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 DPH7Q9BTV6 452 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 ZNF700Q9H0M5 742 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 CHST11Q9NPF2 352 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 TREX1Q9NSU2 369 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 CATSPERZQ9NTU4 200 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 C14orf105Q9NVL8 296 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 RIC8BQ9NVN3 520 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 SPATA7Q9P0W8 599 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 TRPC4Q9UBN4 977 aa12.14□□□□□ -0.47
TDP2-204ENST00000478507 PACSIN2Q9UNF0 486 aaPredicted RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 RUVBL1Q9Y265 456 aaKnown RBP12.14□□□□□ -0.47
TDP2-204ENST00000478507 TRGV8A0A0C4DH27 118 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 A0A0U1RQJ8 604 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 CCL21O00585 134 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 KPNA5O15131 536 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 RASAL1O95294 804 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 GAS8O95995 478 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 F10P00742 488 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 CRYABP02511 175 aaKnown RBP12.13□□□□□ -0.47
TDP2-204ENST00000478507 RPS3P23396 243 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■■■■□ 22.5
TDP2-204ENST00000478507 ARNTP27540 789 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 STIP1P31948 543 aaKnown RBP12.13□□□□□ -0.47
TDP2-204ENST00000478507 PPARGP37231 505 aaPredicted RBP12.13□□□□□ -0.47
TDP2-204ENST00000478507 CCNFP41002 786 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 ADORA2A-AS1P86434 159 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 HKDC1Q2TB90 917 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.13□□□□□ -0.47
TDP2-204ENST00000478507 CTSL3PQ5NE16 218 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 ZNF425Q6IV72 752 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 HIBCHQ6NVY1 386 aaPredicted RBP12.13□□□□□ -0.47
TDP2-204ENST00000478507 MTFR2Q6P444 385 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 TTC23LQ6PF05 361 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 PAQR7Q86WK9 346 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 ZC3H7AQ8IWR0 971 aaKnown RBP12.13□□□□□ -0.47
TDP2-204ENST00000478507 RNF214Q8ND24 703 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 MRFAP1L1Q96HT8 127 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 BIRC8Q96P09 236 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 PANX3Q96QZ0 392 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 OR2A5Q96R48 311 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 PANX2Q96RD6 677 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 CHRAC1Q9NRG0 131 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 SUCOQ9UBS9 1254 aaKnown RBP12.13□□□□□ -0.47
TDP2-204ENST00000478507 SEC14L3Q9UDX4 400 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 GNPTGQ9UJJ9 305 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 CDC14AQ9UNH5 594 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 MRFAP1Q9Y605 127 aa12.13□□□□□ -0.47
TDP2-204ENST00000478507 OR5H15A6NDH6 313 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 MIF4GDA9UHW6 222 aaKnown RBP12.12□□□□□ -0.47
TDP2-204ENST00000478507 MYO1CO00159 1063 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 CD3EAPO15446 510 aaKnown RBP12.12□□□□□ -0.47
TDP2-204ENST00000478507 LIASO43766 372 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 PRAMEF2O60811 474 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 PHF2O75151 1096 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 CXCR2P25025 360 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 ATP5DP30049 168 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 FDFT1P37268 417 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 NAP1L1P55209 391 aaKnown RBP12.12□□□□□ -0.47
TDP2-204ENST00000478507 GTF3C1Q12789 2109 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 NAA25Q14CX7 972 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 CDSNQ15517 529 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 GARNL3Q5VVW2 1013 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 FAAH2Q6GMR7 532 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 PTRHD1Q6GMV3 140 aaKnown RBP12.12□□□□□ -0.47
TDP2-204ENST00000478507 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 PPP1R21Q6ZMI0 780 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 OTOAQ7RTW8 1153 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 LRRC6Q86X45 466 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 MPP5Q8N3R9 675 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 RAB42Q8N4Z0 105 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 CSNK1A1LQ8N752 337 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 CABS1Q96KC9 395 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 ACAT2Q9BWD1 397 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.12□□□□□ -0.47
TDP2-204ENST00000478507 TSPY26PQ9H489 355 aa12.12□□□□□ -0.47
TDP2-204ENST00000478507 MKKSQ9NPJ1 570 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms