RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RALBP11234 206 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 ACVR2AP27037 513 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 ADH7P40394 386 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 CHRNA4P43681 627 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 EMP3P54852 163 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 XIAPP98170 497 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 OC90Q02509 493 aaPredicted RBP6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 CBLBQ13191 982 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 PIGHQ14442 188 aaPredicted RBP6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 MUM1Q2TAK8 710 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC25A35Q3KQZ1 300 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 TCP11X2Q5H9J9 407 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 RTL6Q6ICC9 239 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 PODNL1Q6PEZ8 512 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 UNC5DQ6UXZ4 953 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 GLT6D1Q7Z4J2 308 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 IRF2BP2Q7Z5L9 587 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 HSCBQ8IWL3 235 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 NIPA2Q8N8Q9 360 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 LMNTD1Q8N9Z9 388 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 PLPP7Q8NBV4 271 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 OR5M3Q8NGP4 307 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 OR10Q1Q8NGQ4 319 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 C16orf52Q8NHV5 167 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 BLOC1S5Q8TDH9 187 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC22A18Q96BI1 424 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 FAF2Q96CS3 445 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 CYTH2Q99418 400 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF670Q9BS34 389 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 TRIM45Q9H8W5 580 aaPredicted RBP6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 KCNK13Q9HB14 408 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 GLOD4Q9HC38 313 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 MKKSQ9NPJ1 570 aaPredicted RBP6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 TAB2Q9NYJ8 693 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 TDRKHQ9Y2W6 561 aaKnown RBP6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 FAM215AQ9Y5M1 114 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 IGLV3-16A0A075B6K0 115 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 A0A1W2PPR1 153 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 TFECO14948 347 aaPredicted RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 STX7O15400 261 aaKnown RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 CDC40O60508 579 aaKnown RBP eCLIP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 PDE9AO76083 593 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 EPXP11678 715 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 GZMAP12544 262 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 VAMP1P23763 118 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 EEF1GP26641 437 aaKnown RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 PKLRP30613 574 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 RFC3P40938 356 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 WNT3AP56704 352 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 SLC1A5Q15758 541 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 PRTGQ2VWP7 1150 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 TEX44Q53QW1 395 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 FIGNQ5HY92 759 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 FBXO42Q6P3S6 717 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 ZNF449Q6P9G9 518 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 CPEB2Q7Z5Q1 589 aaKnown RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 P3H2Q8IVL5 708 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 ZC3H7AQ8IWR0 971 aaKnown RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 SULF2Q8IWU5 870 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 LGI4Q8N135 537 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 VWA5B2Q8N398 1253 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 ARHGEF39Q8N4T4 335 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 SLC25A41Q8N5S1 370 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 C2orf73Q8N5S3 287 aaPredicted RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 ZFP62Q8NB50 900 aaPredicted RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 OR52N2Q8NGI0 321 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 M1APQ8TC57 530 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 HEXDCQ8WVB3 486 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 MRGPRX2Q96LB1 330 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 COPS8Q99627 209 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 YIPF2Q9BWQ6 316 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 VN1R1Q9GZP7 353 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 MRPL47Q9HD33 250 aaKnown RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 MMP25Q9NPA2 562 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 PNPLA3Q9NST1 481 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 INTS7Q9NVH2 962 aaKnown RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 FAM153AQ9UHL3 310 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 CDC14AQ9UNH5 594 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 KLK4Q9Y5K2 254 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 ARL5AQ9Y689 179 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 SCINQ9Y6U3 715 aa6.89□□□□□ -1.31
SPTLC1-205ENST00000477888 CPAMD8Q8IZJ3 1885 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 A0A0J9YVX5 310 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 NPIPA2E9PIF3 369 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 NPIPA3F8WFD2 350 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 KLRC4-KLRK1H3BQV0 150 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 LIN7AO14910 233 aaPredicted RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 FOXS1O43638 330 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 NRP2O60462 931 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 S1PR4O95977 384 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 IFNA2P01563 188 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 EIF2S1P05198 315 aaKnown RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 GSTM1P09488 218 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 CD9P21926 228 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 MAPK1P28482 360 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 UQCRC1P31930 480 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 PRKCIP41743 596 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms