RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMPRSS15P98073 1019 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 OTUD4Q01804 1114 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 BOP1Q14137 746 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 TMED2Q15363 201 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 SLC5A12Q1EHB4 618 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 TCTE1Q5JU00 501 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 SLC35F1Q5T1Q4 408 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 FCRL6Q6DN72 434 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 IGFL3Q6UXB1 125 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 CERS6Q6ZMG9 384 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 MAMDC2Q7Z304 686 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 TSPYL5Q86VY4 417 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 SERPINA9Q86WD7 417 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 CCDC103Q8IW40 242 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 SYCE1Q8N0S2 351 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 GALNT16Q8N428 558 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ZBTB2Q8N680 514 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ZNF655Q8N720 491 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 TTC29Q8NA56 475 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 OR2Y1Q8NGV0 311 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ACTL9Q8TC94 416 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ELMO1Q92556 727 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 HEMGNQ9BXL5 484 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 OSBPL8Q9BZF1 889 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 OR52A5Q9H2C5 316 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 TSPY26PQ9H489 355 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 EPS8L2Q9H6S3 715 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 MRM3Q9HC36 420 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 NLE1Q9NVX2 485 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 GPATCH2Q9NW75 528 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 SMARCAL1Q9NZC9 954 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 HYOU1Q9Y4L1 999 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 PCDHA3Q9Y5H8 950 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 PCDHA13Q9Y5I0 950 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 MAST4O15021 2626 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 IGLV3-16A0A075B6K0 115 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 CCDC78A2IDD5 438 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ISM1B1AKI9 464 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 KPNA5O15131 536 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 PFDN6O15212 129 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 GSNP06396 782 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 CTNNA1P35221 906 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ADRA1AP35348 466 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 UQCRFS1P47985 274 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ZNF140P52738 457 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 SOX8P57073 446 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 XIAPP98170 497 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 POU4F1Q01851 419 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ABRQ12979 859 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ATP1A4Q13733 1029 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 FAM214AQ32MH5 1076 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 PTCHD3Q3KNS1 767 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 TM4SF20Q53R12 229 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 DNAJC21Q5F1R6 531 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 AARS2Q5JTZ9 985 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 DCAF10Q5QP82 559 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 FAM198BQ6UWH4 519 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 NLRP9Q7RTR0 991 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 MRGPREQ86SM8 312 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 LURAP1LQ8IV03 231 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 OR13C4Q8NGS5 318 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 FKBP10Q96AY3 582 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 RUFY1Q96T51 708 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 HGH1Q9BTY7 390 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 NUDT9Q9BW91 350 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 AKIRIN1Q9H9L7 192 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 SEMA3GQ9NS98 782 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 AP5S1Q9NUS5 200 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 TDRKHQ9Y2W6 561 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 PIKFYVEQ9Y2I7 2098 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 TRBV5-4A0A0C4DH59 114 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 ANKUB1A6NFN9 424 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 TCP11X1B4DZS4 312 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 AGPSO00116 658 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 AP3B1O00203 1094 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 BTN3A3O00478 584 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 PJA2O43164 708 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 LCA5LO95447 670 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 TGFB1P01137 390 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 CHRM5P08912 532 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-214ENST00000477152 UGT2B7P16662 529 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 GLRBP48167 497 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 CARSP49589 748 aaKnown RBP6.98□□□□□ -1.29
BRCA1-214ENST00000477152 PRKG2Q13237 762 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 ZNF460Q14592 562 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 GRM7Q14831 915 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 LLGL1Q15334 1064 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 EIF2S3LQ2VIR3 472 aaKnown RBP6.98□□□□□ -1.29
BRCA1-214ENST00000477152 NKAIN1Q4KMZ8 207 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 AGAP7PQ5VUJ5 663 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 PACS1Q6VY07 963 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 CDHR3Q6ZTQ4 885 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 ADGRF3Q8IZF5 1079 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 RBMXL3Q8N7X1 1067 aaKnown RBP6.98□□□□□ -1.29
BRCA1-214ENST00000477152 DNAAF3Q8N9W5 541 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 SLC38A9Q8NBW4 561 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 OR5K2Q8NHB8 316 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 MAGEC3Q8TD91 643 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms