RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 P4HTMQ9NXG6 502 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 GPR132Q9UNW8 380 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 LRRD1A4D1F6 860 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 SDR42E2A6NKP2 422 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 C17orf105B2RV13 164 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 KINO60870 393 aaKnown RBP5.39□□□□□ -1.55
VPS50-212ENST00000476413 C9P02748 559 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 CA6P23280 308 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 DUTP33316 252 aaKnown RBP5.39□□□□□ -1.55
VPS50-212ENST00000476413 HNF4AP41235 474 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 OR3A1P47881 315 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 CACNG1Q06432 222 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 RCN2Q14257 317 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 P2RY6Q15077 328 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 ACCSLQ4AC99 568 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 SLC35D3Q5M8T2 416 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 PIGWQ7Z7B1 504 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 AMIGO1Q86WK6 493 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 SIAH3Q8IW03 269 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 CABS1Q96KC9 395 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 PIGQQ9BRB3 760 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 LSG1Q9H089 658 aaKnown RBP5.39□□□□□ -1.55
VPS50-212ENST00000476413 SRD5A3Q9H8P0 318 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 KCNG2Q9UJ96 466 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 PCDHGA1Q9Y5H4 931 aa5.39□□□□□ -1.55
VPS50-212ENST00000476413 MYH14Q7Z406 1995 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 TRIM64A6NGJ6 449 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 TRIM64BA6NI03 449 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 CTDSPLO15194 276 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 GH1P01241 217 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 CRYAAP02489 173 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 APOHP02749 345 aaPredicted RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 ATP1A1P05023 1023 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 STAG3L1P0CL83 205 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 CD59P13987 128 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 ALDH1B1P30837 517 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 CSTF2P33240 577 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS50-212ENST00000476413 SNU13P55769 128 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 STX1BP61266 288 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 GPR17Q13304 367 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 LASP1Q14847 261 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 ZNF718Q3SXZ3 478 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 GPR33Q49SQ1 333 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 ODF2Q5BJF6 829 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 FAM76BQ5HYJ3 339 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 ZNF770Q6IQ21 691 aaPredicted RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 C19orf48Q6RUI8 117 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 TMEM270Q6UE05 265 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 MARK2Q7KZI7 788 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 C10orf53Q8N6V4 93 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 NOA1Q8NC60 698 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 KRT35Q92764 455 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 PDLIM5Q96HC4 596 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 KLHL5Q96PQ7 755 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 ATG101Q9BSB4 218 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 CDK19Q9BWU1 502 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 CPVLQ9H3G5 476 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 ADPRHL2Q9NX46 363 aa5.38□□□□□ -1.55
VPS50-212ENST00000476413 PA2G4Q9UQ80 394 aaKnown RBP5.38□□□□□ -1.55
VPS50-212ENST00000476413 IGHV4-61A0A0C4DH41 118 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 SMIM30A4D0T7 59 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 KBTBD13C9JR72 458 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 H0YIG0 161 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 BMPR1BO00238 502 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 P2RY10O00398 339 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 KRT36O76013 467 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 IGHV4-59P01825 116 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 UROSP10746 265 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 DARSP14868 501 aaKnown RBP5.37□□□□□ -1.55
VPS50-212ENST00000476413 KHKP50053 298 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 SULT2A1Q06520 285 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 TRAP1Q12931 704 aaKnown RBP5.37□□□□□ -1.55
VPS50-212ENST00000476413 SQLEQ14534 574 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 RBBP5Q15291 538 aaKnown RBP5.37□□□□□ -1.55
VPS50-212ENST00000476413 XKR6Q5GH73 641 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 FAM46CQ5VWP2 391 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 GDPD4Q6W3E5 623 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 RBMS3Q6XE24 437 aaKnown RBP5.37□□□□□ -1.55
VPS50-212ENST00000476413 KCTD9Q7L273 389 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 TRPT1Q86TN4 253 aaKnown RBP5.37□□□□□ -1.55
VPS50-212ENST00000476413 PIGZQ86VD9 579 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 MEX3DQ86XN8 651 aaKnown RBP5.37□□□□□ -1.55
VPS50-212ENST00000476413 CLYBLQ8N0X4 340 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 GPATCH11Q8N954 259 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 SAP25Q8TEE9 199 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 PGM2Q96G03 612 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 NSL1Q96IY1 281 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 AK8Q96MA6 479 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 MMP28Q9H239 520 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 BICC1Q9H694 974 aaKnown RBP5.37□□□□□ -1.55
VPS50-212ENST00000476413 SIX2Q9NPC8 291 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 ECHDC1Q9NTX5 307 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 FAM118AQ9NWS6 357 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 PKD2L2Q9NZM6 624 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 FLRT3Q9NZU0 649 aa5.37□□□□□ -1.55
VPS50-212ENST00000476413 A0A0A6YYC8 382 aaPredicted RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 A0A0B4J203 849 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 TRBV5-5A0A0J9YX44 114 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 A0A1W2PRV1 198 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 I3L1I5 382 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms