RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 GRIA3P42263 894 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 CDKN2DP55273 166 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 MGAT5Q09328 741 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 TCTE1Q5JU00 501 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 MLIPQ5VWP3 458 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 FCRL6Q6DN72 434 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 FAM45BPQ6NSW5 357 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 SUSD1Q6UWL2 747 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 MRGPREQ86SM8 312 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 EFCAB3Q8N7B9 438 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 GALNT11Q8NCW6 608 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 FDCSPQ8NFU4 85 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 OR2A1Q8NGT9 310 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 OR2Y1Q8NGV0 311 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 FAM45AQ8TCE6 357 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 PYROXD1Q8WU10 500 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 SMAD5Q99717 465 aaKnown RBP15.51■□□□□ 0.07
COL1A1-205ENST00000476387 MRPS30Q9NP92 439 aaKnown RBP15.51■□□□□ 0.07
COL1A1-205ENST00000476387 SAYSD1Q9NPB0 183 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 ENAMQ9NRM1 1142 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 NSMCE4AQ9NXX6 385 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 GPR83Q9NYM4 423 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 IFT80Q9P2H3 777 aaPredicted RBP15.51■□□□□ 0.07
COL1A1-205ENST00000476387 NDOR1Q9UHB4 597 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 SPTBN1Q01082 2364 aaKnown RBP15.51■□□□□ 0.07
COL1A1-205ENST00000476387 EIF3HO15372 352 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 OTX2P32243 289 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 FOLR3P41439 243 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 GCGRP47871 477 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 ARSFP54793 590 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 SRSF1Q07955 248 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 SP140Q13342 867 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 NADK2Q4G0N4 442 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 NKAIN1Q4KMZ8 207 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 THEMIS2Q5TEJ8 643 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 HECTD2Q5U5R9 776 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 C1orf189Q5VU69 101 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 DUPD1Q68J44 220 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 MRPL14Q6P1L8 145 aaKnown RBP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 PAQR3Q6TCH7 311 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 CYHR1Q6ZMK1 362 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 CAPN12Q6ZSI9 719 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 ZNF572Q7Z3I7 529 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 SPNS2Q8IVW8 549 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 TTC29Q8NA56 475 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 CPT1CQ8TCG5 803 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 MCOLN3Q8TDD5 553 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 ZNF480Q8WV37 535 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 EEF1AKMT1Q8WVE0 214 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 LINGO1Q96FE5 620 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 FER1L6-AS2Q96M78 137 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 NUDT9Q9BW91 350 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 ABCF3Q9NUQ8 709 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 UTP6Q9NYH9 597 aaKnown RBP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 C5AR2Q9P296 337 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 DHCR7Q9UBM7 475 aaKnown RBP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 TAC3Q9UHF0 121 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 CDC23Q9UJX2 597 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 PTRH2Q9Y3E5 179 aaKnown RBP15.5■□□□□ 0.07
COL1A1-205ENST00000476387 KLK4Q9Y5K2 254 aa15.5■□□□□ 0.07
COL1A1-205ENST00000476387 CYSRT1A8MQ03 144 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 PEX12O00623 359 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 KLHL41O60662 606 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 VPS4BO75351 444 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 URI1O94763 535 aaPredicted RBP15.49■□□□□ 0.07
COL1A1-205ENST00000476387 CTSBP07858 339 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 VARSP26640 1264 aaKnown RBP15.49■□□□□ 0.07
COL1A1-205ENST00000476387 IL2P60568 153 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 TIAL1Q01085 375 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL1A1-205ENST00000476387 CAV1Q03135 178 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 GRM7Q14831 915 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 VWA5B1Q5TIE3 1220 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 ICE2Q659A1 982 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 C8orf74Q6P047 294 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 STRA8Q7Z7C7 330 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 SLC26A11Q86WA9 606 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 PPFIBP2Q8ND30 876 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 FKBP10Q96AY3 582 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 NACC2Q96BF6 587 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 PTERQ96BW5 349 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 DPH7Q9BTV6 452 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 SLC6A20Q9NP91 592 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 GRHL1Q9NZI5 618 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 VPS4AQ9UN37 437 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 MAP4K5Q9Y4K4 846 aa15.49■□□□□ 0.07
COL1A1-205ENST00000476387 NUP210LQ5VU65 1888 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 A0A0J9YVX5 310 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 A0A1B0GX78 115 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 OR2A25A4D2G3 310 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 A6NL46 340 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 E7ENX8 843 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 SLC16A5O15375 505 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 SRPX2O60687 465 aaPredicted RBP15.48■□□□□ 0.07
COL1A1-205ENST00000476387 CTSVO60911 334 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 ONECUT2O95948 504 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 ALAS2P22557 587 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 FDXRP22570 491 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 IMPA1P29218 277 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 VSX2P58304 361 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms