RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 A0A087WW49 117 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 TRAV34A0A0B4J273 112 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 A0A1W2PPW3 197 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 CDK2AP2O75956 126 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 LUC7L3O95232 432 aaKnown RBP4.38□□□□□ -1.71
PTCD3-211ENST00000476215 MOCS3O95396 460 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 APOHP02749 345 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-211ENST00000476215 GBAP04062 536 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 ALDH4A1P30038 563 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 BMXP51813 675 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 ATP12AP54707 1039 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 SNRPD1P62314 119 aaKnown RBP4.38□□□□□ -1.71
PTCD3-211ENST00000476215 ITGA9Q13797 1035 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 HNRNPDQ14103 355 aaKnown RBP4.38□□□□□ -1.71
PTCD3-211ENST00000476215 PTGISQ16647 500 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 UGCGQ16739 394 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 XKR6Q5GH73 641 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 UGT3A1Q6NUS8 523 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 P2RY12Q9H244 342 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 ATP13A3Q9H7F0 1226 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 EPHA6Q9UF33 1036 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 PPP2R2CQ9Y2T4 447 aa4.38□□□□□ -1.71
PTCD3-211ENST00000476215 CEP164Q9UPV0 1460 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 TOP2AP11388 1531 aaKnown RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 O00370 1275 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 NTN3O00634 580 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 FPGTO14772 594 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 EXTL3O43909 919 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 IGLV1-44P01699 117 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 RGS7P49802 495 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 ADAM5Q6NVV9 412 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 CTR9Q6PD62 1173 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 PSRC1Q6PGN9 363 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 BHLHB9Q6PI77 547 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 DCLRE1AQ6PJP8 1040 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 PET117Q6UWS5 81 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 NOTCH2NLQ7Z3S9 236 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 GALNTL5Q7Z4T8 443 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 NRARPQ7Z6K4 114 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 LACC1Q8IV20 430 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 RAB42Q8N4Z0 105 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 GPRC5AQ8NFJ5 357 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 DBF4BQ8NFT6 615 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 CTCFLQ8NI51 663 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 MRGPRDQ8TDS7 321 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 TSACCQ96A04 125 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 PGM2Q96G03 612 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 GMPPAQ96IJ6 420 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 MAGED4Q96JG8 741 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 C4orf45Q96LM5 186 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 MAP3K3Q99759 626 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 WDR13Q9H1Z4 485 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-211ENST00000476215 MAN1B1Q9UKM7 699 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 PYGO1Q9Y3Y4 419 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 POMT1Q9Y6A1 747 aa4.37□□□□□ -1.71
PTCD3-211ENST00000476215 WDR62O43379 1518 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 A0A087WV48 116 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 HTR3EA5X5Y0 456 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 MSGN1A6NI15 193 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 FAM86B1E9PN63 330 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 SLCO1B7G3V0H7 640 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 WDR46O15213 610 aaKnown RBP4.36□□□□□ -1.71
PTCD3-211ENST00000476215 SERPING1P05155 500 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 FAM86B2P0C5J1 330 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 STAG3L1P0CL83 205 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 ADRA2CP18825 462 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 HOXC13P31276 330 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 TUBB2AQ13885 445 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 FAM174BQ3ZCQ3 159 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 FAM91A1Q658Y4 838 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 PWWP2BQ6NUJ5 590 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 Q6ZSR9 355 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 IL17RELQ6ZVW7 336 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 SPATA19Q7Z5L4 167 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 AMIGO1Q86WK6 493 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 LSMEM2Q8N112 164 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 ADAD2Q8NCV1 583 aaKnown RBP4.36□□□□□ -1.71
PTCD3-211ENST00000476215 OR7A2PQ8NGA2 310 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 C9orf43Q8TAL5 461 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-211ENST00000476215 DEPDC1BQ8WUY9 529 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 HEXDCQ8WVB3 486 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 ARHGAP45Q92619 1136 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 CENPTQ96BT3 561 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 PYCR2Q96C36 320 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 TUBB2BQ9BVA1 445 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 THAP2Q9H0W7 228 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 FGF22Q9HCT0 170 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 ATAD3AQ9NVI7 634 aa4.36□□□□□ -1.71
PTCD3-211ENST00000476215 URB2Q14146 1524 aaKnown RBP4.36□□□□□ -1.71
PTCD3-211ENST00000476215 MEIOCA2RUB1 952 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 CCL24O00175 119 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 NR5A2O00482 541 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 ZNF195O14628 629 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 KHDRBS3O75525 346 aaKnown RBP4.35□□□□□ -1.71
PTCD3-211ENST00000476215 VIMP08670 466 aaKnown RBP4.35□□□□□ -1.71
PTCD3-211ENST00000476215 FAM58BPP0C7Q3 252 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 SPP1P10451 314 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 GP1BBP13224 206 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms