RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 KLK4Q9Y5K2 254 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 ITPR2Q14571 2701 aa6.73□□□□□ -1.33
LIMD1-204ENST00000474665 POLQO75417 2590 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MED13Q9UHV7 2174 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 GSAPA4D1B5 854 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 TLCD2A6NGC4 264 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 LRRC14BA6NHZ5 514 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SLC9B1P1A6NJY1 282 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 C2orf74A8MZ97 194 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 H3BMH7 237 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 K7ENP7 123 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MAP2K7O14733 419 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CTSVO60911 334 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 ERLIN1O75477 346 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SASH3O75995 380 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MT-ND3P03897 115 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MPOP05164 745 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 FGF3P11487 239 aaPredicted RBP6.72□□□□□ -1.33
LIMD1-204ENST00000474665 COL6A2P12110 1019 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 FOLR1P15328 257 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 NELFEP18615 380 aaKnown RBP6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CYP2A7P20853 494 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MAGP20916 626 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MAP4P27816 1152 aaKnown RBP6.72□□□□□ -1.33
LIMD1-204ENST00000474665 GGT5P36269 586 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 GRIA3P42263 894 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SLC6A12P48065 614 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SEPHS1P49903 392 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 TBPL1P62380 186 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MPP2Q14168 576 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CASP8Q14790 479 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 KIR2DS3Q14952 304 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 ACAP2Q15057 778 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SLC5A12Q1EHB4 618 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 FAM83EQ2M2I3 478 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 PTCHD3Q3KNS1 767 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 KRT71Q3SY84 523 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CDKL4Q5MAI5 379 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 PHF19Q5T6S3 580 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CACHD1Q5VU97 1274 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 FAM219BQ5XKK7 198 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 FCRL6Q6DN72 434 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 ZNF425Q6IV72 752 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 KLHL35Q6PF15 583 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 INO80CQ6PI98 192 aaPredicted RBP6.72□□□□□ -1.33
LIMD1-204ENST00000474665 LRIG3Q6UXM1 1119 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 TAOK1Q7L7X3 1001 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 GPSM1Q86YR5 675 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 KLHDC8AQ8IYD2 350 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SYTL1Q8IYJ3 562 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 C4orf33Q8N1A6 199 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 D2HGDHQ8N465 521 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 BANPQ8N9N5 519 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 PDPRQ8NCN5 879 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 OR2L3Q8NG85 312 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 RHEBL1Q8TAI7 183 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 STAG3L4Q8TBR4 150 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 MAGEC3Q8TD91 643 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 KCNE4Q8WWG9 221 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 SMPDL3AQ92484 453 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 ZDHHC12Q96GR4 267 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 DEPDC7Q96QD5 511 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CD180Q99467 661 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 DPYSL5Q9BPU6 564 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 ACAT2Q9BWD1 397 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 RAB11FIP5Q9BXF6 653 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CUEDC1Q9NWM3 386 aaPredicted RBP6.72□□□□□ -1.33
LIMD1-204ENST00000474665 ZNF446Q9NWS9 450 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 CPSF2Q9P2I0 782 aaKnown RBP6.72□□□□□ -1.33
LIMD1-204ENST00000474665 XPR1Q9UBH6 696 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 LNPEPQ9UIQ6 1025 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 TLK1Q9UKI8 766 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 BTRCQ9Y297 605 aa6.72□□□□□ -1.33
LIMD1-204ENST00000474665 A0A0J9YY10 115 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 CCDC189A1A4V9 331 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 OR2A25A4D2G3 310 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 NCF1BA6NI72 391 aaPredicted RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 NCF1CA8MVU1 366 aaPredicted RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 ISM1B1AKI9 464 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 G3V2L1 256 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 MATN2O00339 956 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 HGSO14964 777 aaPredicted RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 TOX3O15405 576 aaPredicted RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 ZW10O43264 779 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 TYROBPO43914 113 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 DLX3O60479 287 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 SIX3O95343 332 aaPredicted RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 PROCP04070 461 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 EBLN1P0CF75 366 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 NCF1P14598 390 aaPredicted RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 KRT15P19012 456 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 KRT4P19013 534 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 ITIH1P19827 911 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 OAS2P29728 719 aaKnown RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 CRHR1P34998 444 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 HSD17B2P37059 387 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 PRDX1Q06830 199 aaKnown RBP6.71□□□□□ -1.34
LIMD1-204ENST00000474665 IFFO1Q0D2I5 559 aa6.71□□□□□ -1.34
LIMD1-204ENST00000474665 PRKAA1Q13131 559 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms