RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 NPPBP16860 134 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CKMT2P17540 419 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 MAGP20916 626 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 ACP1P24666 158 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 VARSP26640 1264 aaKnown RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 PRDX3P30048 256 aaKnown RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 ARRB2P32121 409 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CSF2RBP32927 897 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 LSP1P33241 339 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 GRK3P35626 688 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CCR8P51685 355 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 GFERP55789 205 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 PPP1CAP62136 330 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 ABATP80404 500 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 OCRLQ01968 901 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 PRDX1Q06830 199 aaKnown RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 GALNT1Q10472 559 aaPredicted RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 SLBPQ14493 270 aaKnown RBP eCLIP8.03□□□□□ -1.12
CNN3-205ENST00000474409 SLC5A12Q1EHB4 618 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 TUBB8Q3ZCM7 444 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CCDC157Q569K6 752 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 PAGE2BQ5JRK9 111 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CATSPEREQ5SY80 951 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 STPG1Q5TH74 334 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 NKAIN2Q5VXU1 208 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CES4AQ5XG92 561 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 ATG9BQ674R7 924 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 GRHL2Q6ISB3 625 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 FAM92BQ6ZTR7 304 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 MILR1Q7Z6M3 343 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 SYVN1Q86TM6 617 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 TBC1D19Q8N5T2 526 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 ZNF781Q8N8C0 355 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CDYL2Q8N8U2 506 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 OR2A1Q8NGT9 310 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 OR6Y1Q8NGX8 325 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 PTCD3Q96EY7 689 aaKnown RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 CHMP6Q96FZ7 201 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 ZDHHC12Q96GR4 267 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CDK15Q96Q40 435 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 OR2A14Q96R47 310 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CD180Q99467 661 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 SORT1Q99523 831 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 CDC6Q99741 560 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 AIF1LQ9BQI0 150 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 DPH7Q9BTV6 452 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 EFCAB11Q9BUY7 163 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 NTMT1Q9BV86 223 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 ILKAPQ9H0C8 392 aaPredicted RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 ABCG4Q9H172 646 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 SLC6A20Q9NP91 592 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 SLCO1B3Q9NPD5 702 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 FGFR1OP2Q9NVK5 253 aa8.03□□□□□ -1.12
CNN3-205ENST00000474409 MARCOQ9UEW3 520 aaPredicted RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 RIF1Q5UIP0 2472 aaKnown RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 MN1Q10571 1320 aaPredicted RBP8.03□□□□□ -1.12
CNN3-205ENST00000474409 H7BY64 318 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 PPP6CO00743 305 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 UBFD1O14562 309 aaKnown RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 FFAR3O14843 346 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 AZIN1O14977 448 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 GPR42O15529 346 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 MAP3K7O43318 606 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 PRICKLE3O43900 615 aaPredicted RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 GFRA3O60609 400 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 EDF1O60869 148 aaKnown RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 SNNO75324 88 aaPredicted RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 CPNE6O95741 557 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 GP1BAP07359 652 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 CAPN1P07384 714 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 C1GALT1C1LP0DN25 315 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 TROVE2P10155 538 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNN3-205ENST00000474409 KITP10721 976 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 PCNAP12004 261 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 JUPP14923 745 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 EPORP19235 508 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 TGM1P22735 817 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 HRH2P25021 359 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 CXCR2P25025 360 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 HNF4AP41235 474 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 RPL14P50914 215 aaKnown RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 SH3BP2P78314 561 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 PHEXP78562 749 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 REEP5Q00765 189 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 MEF2AQ02078 507 aaPredicted RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 LAPTM5Q13571 262 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 DDX39BQ13838 428 aaKnown RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 SPIDRQ14159 915 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 DOC2AQ14183 400 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 TBCCQ15814 346 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 CPSF6Q16630 551 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNN3-205ENST00000474409 HIST2H2ACQ16777 129 aaPredicted RBP8.02□□□□□ -1.13
CNN3-205ENST00000474409 GGTA1PQ4G0N0 100 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 SNAP47Q5SQN1 464 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 KIAA1614Q5VZ46 1190 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 LIPJQ5W064 366 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 CLEC6AQ6EIG7 209 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 HIST2H2AA3Q6FI13 130 aa8.02□□□□□ -1.13
CNN3-205ENST00000474409 LETMD1Q6P1Q0 360 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms