RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CTSBP07858 339 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 ENO2P09104 434 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-203ENST00000474047 RAB40ALP0C0E4 278 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 STMN1P16949 149 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 RPS18P62269 152 aaKnown RBP13.62□□□□□ -0.23
VAMP4-203ENST00000474047 TBPL1P62380 186 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 YBX1P67809 324 aaKnown RBP13.62□□□□□ -0.23
VAMP4-203ENST00000474047 CRTC2Q53ET0 693 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-203ENST00000474047 ATP1A1-AS1Q5TC04 95 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 YOD1Q5VVQ6 348 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-203ENST00000474047 PRAMEF13Q5VWM6 474 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 LCN10Q6JVE6 187 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 MBOAT1Q6ZNC8 495 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 FRA10AC1Q70Z53 315 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 SYVN1Q86TM6 617 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 RUFY1Q96T51 708 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 NLNQ9BYT8 704 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 FAM117AQ9C073 453 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 CAB39LQ9H9S4 337 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 POPDC3Q9HBV1 291 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 IFT80Q9P2H3 777 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-203ENST00000474047 CTNNAL1Q9UBT7 734 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 POLHQ9Y253 713 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 LAMA5O15230 3695 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 ZFHX4Q86UP3 3567 aa13.62□□□□□ -0.23
VAMP4-203ENST00000474047 OR2A25A4D2G3 310 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 CD63P08962 238 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 PIM1P11309 404 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 HRH2P25021 359 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 NAB1Q13506 487 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 FRMPD2BQ6IN97 320 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 CAPN13Q6MZZ7 669 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 TMEM207Q6UWW9 146 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 ZNF517Q6ZMY9 492 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 CEP97Q8IW35 865 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 APOBEC4Q8WW27 367 aaKnown RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 MRRFQ96E11 262 aaKnown RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 FMO2Q99518 471 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 EGFL8Q99944 293 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 CUTCQ9NTM9 273 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 LOC105369274A0A096LPK9 316 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 LOC102723532A0A0G2JNH3 316 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 A0A1B0GX78 115 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 HYKKA2RU49 373 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 NPEPPSL1A6NEC2 478 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 H3BMH7 237 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 H7BY64 318 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 RECKO95980 971 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 FAM87AP0C7U9 286 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 SFTPCP11686 197 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 EZRP15311 586 aaKnown RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 SLC9A5Q14940 896 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 SLMAPQ14BN4 828 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 NCF4Q15080 339 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 UAP1Q16222 522 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 LINC00303Q3SY05 128 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 FBXO42Q6P3S6 717 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 RAPH1Q70E73 1250 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 RNF44Q7L0R7 432 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 C17orf64Q86WR6 236 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 LRRC56Q8IYG6 542 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 OR4N4Q8N0Y3 316 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 ANKRD7Q92527 254 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 PRAP1Q96NZ9 151 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 GPR22Q99680 433 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 HAUS8Q9BT25 410 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 DHRS4Q9BTZ2 278 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 TMEM184CQ9NVA4 438 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 TCFL5Q9UL49 500 aa13.61□□□□□ -0.23
VAMP4-203ENST00000474047 NOVA2Q9UNW9 492 aaKnown RBP13.61□□□□□ -0.23
VAMP4-203ENST00000474047 SEC16AO15027 2179 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 H0YGG7 62 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 CDC7O00311 574 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 DSCR3O14972 297 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 PHGDHO43175 533 aaKnown RBP13.6□□□□□ -0.23
VAMP4-203ENST00000474047 NRP2O60462 931 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 ANXA5P08758 320 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 GRK3P35626 688 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 ARF3P61204 181 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-203ENST00000474047 UGT8Q16880 541 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 NKAIN1Q4KMZ8 207 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 FAM198BQ6UWH4 519 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 PAQR7Q86WK9 346 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 IFT20Q8IY31 132 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 FBXL8Q96CD0 374 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 CABS1Q96KC9 395 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 GBP5Q96PP8 586 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 CYTH2Q99418 400 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 CUEDC1Q9NWM3 386 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-203ENST00000474047 MAN2B2Q9Y2E5 1009 aa13.6□□□□□ -0.23
VAMP4-203ENST00000474047 IGKV1-8A0A0C4DH67 115 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 TXNDC9O14530 226 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 FAM155BO75949 473 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 PRB1P04280 392 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 CCDC166P0CW27 439 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 POLE2P56282 527 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 RAB10P61026 200 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 ZNF425Q6IV72 752 aa13.59□□□□□ -0.23
VAMP4-203ENST00000474047 PCSK4Q6UW60 755 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms