RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-204	ENST00000472476	DNAJB8	Q8NHS0	232 aa		13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	LRRC45	Q96CN5	670 aa		13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	DPH7	Q9BTV6	452 aa		13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	TGIF2	Q9GZN2	237 aa		13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	RUBCNL	Q9H714	662 aa		13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	IGSF5	Q9NSI5	407 aa		13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	RUVBL1	Q9Y265	456 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	SCN3A	Q9NY46	2000 aa		13.62	□□□□□ -0.23
TARDBP-204	ENST00000472476	BTNL10	A8MVZ5	291 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	PRMT5	O14744	637 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	MATN4	O95460	622 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	ERG	P11308	486 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	FDXR	P22570	491 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	KIR3DL1	P43629	444 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	GBX1	Q14549	363 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	C3AR1	Q16581	482 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	SYT16	Q17RD7	645 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	MUM1	Q2TAK8	710 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	HKDC1	Q2TB90	917 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	FASTKD1	Q53R41	847 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	RIPOR1	Q6ZS17	1223 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	PRUNE1	Q86TP1	453 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	PAQR7	Q86WK9	346 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	OR6P1	Q8NGX9	317 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	OR2A5	Q96R48	311 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	ZFYVE21	Q9BQ24	234 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	RAB11FIP5	Q9BXF6	653 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	CHST11	Q9NPF2	352 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	TRPC4	Q9UBN4	977 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	SEC14L3	Q9UDX4	400 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	ZNF835	Q9Y2P0	537 aa		13.61	□□□□□ -0.23
TARDBP-204	ENST00000472476	SPG11	Q96JI7	2443 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	ERI2	A8K979	691 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	PRAMEF2	O60811	474 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	ZNF189	O75820	626 aa	Predicted RBP	13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	WFS1	O76024	890 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	RASAL1	O95294	804 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	OASL	Q15646	514 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	CTSL3P	Q5NE16	218 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	LRRC8B	Q6P9F7	803 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	CNST	Q6PJW8	725 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	RPTN	Q6XPR3	784 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	SPNS2	Q8IVW8	549 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	DNAAF3	Q8N9W5	541 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	ATG4A	Q8WYN0	398 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	BIRC8	Q96P09	236 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	TTC1	Q99614	292 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	NPAS2	Q99743	824 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	PLCD4	Q9BRC7	762 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	CHRAC1	Q9NRG0	131 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	STMN3	Q9NZ72	180 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	GALP	Q9UBC7	116 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	SUCO	Q9UBS9	1254 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	SH3BGRL2	Q9UJC5	107 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	TCAF1	Q9Y4C2	921 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	FAM169A	Q9Y6X4	670 aa		13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	MAP1A	P78559	2803 aa	Predicted RBP	13.6	□□□□□ -0.23
TARDBP-204	ENST00000472476	OR5H15	A6NDH6	313 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	SOWAHD	A6NJG2	315 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	CD3EAP	O15446	510 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	P2RX6	O15547	441 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	SLC19A2	O60779	497 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	CRYAB	P02511	175 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	COX6B1	P14854	86 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	ETS1	P14921	441 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	RPS3	P23396	243 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	3e-8	■□□□□ 11
TARDBP-204	ENST00000472476	CXCR2	P25025	360 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	MAT1A	Q00266	395 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	SPA17	Q15506	151 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.59	□□□□□ -0.23	3e-6	■■■■□ 22.6
TARDBP-204	ENST00000472476	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	ZNF425	Q6IV72	752 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	H3F3C	Q6NXT2	135 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	XKRX	Q6PP77	449 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	SUSD1	Q6UWL2	747 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	ACBD4	Q8NC06	268 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	PEX13	Q92968	403 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	MVB12A	Q96EY5	273 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	CABS1	Q96KC9	395 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	ACAT2	Q9BWD1	397 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	TSSK1B	Q9BXA7	367 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	TREX1	Q9NSU2	369 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	CATSPERZ	Q9NTU4	200 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	RIC8B	Q9NVN3	520 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	TINAG	Q9UJW2	476 aa		13.59	□□□□□ -0.23
TARDBP-204	ENST00000472476	NIPBL	Q6KC79	2804 aa	eCLIP	13.58	□□□□□ -0.24
TARDBP-204	ENST00000472476		A0A0A6YYC8	382 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-204	ENST00000472476	IGHV3-20	A0A0C4DH32	117 aa		13.58	□□□□□ -0.24
TARDBP-204	ENST00000472476	OR2W5	A6NFC9	320 aa		13.58	□□□□□ -0.24
TARDBP-204	ENST00000472476		F8W8V4	182 aa		13.58	□□□□□ -0.24
TARDBP-204	ENST00000472476		I3L1I5	382 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-204	ENST00000472476	ZNHIT1	O43257	154 aa		13.58	□□□□□ -0.24
TARDBP-204	ENST00000472476	MAN1A2	O60476	641 aa		13.58	□□□□□ -0.24

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