RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 KLF2Q9Y5W3 355 aaPredicted RBP3.64□□□□□ -1.83
CD46-213ENST00000471987 SELENOKQ9Y6D0 94 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 NEMP2A6NFY4 417 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 AGAP14A8MT82 685 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 SHISA9B4DS77 424 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 HPP00738 406 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 GCH1P30793 250 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 OR3A2P47893 321 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 CDH13P55290 713 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 MC1RQ01726 317 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 TMEM132DQ14C87 1099 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 RALBP1Q15311 655 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 FAM189A2Q15884 450 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 FAM182AQ5T1J6 154 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 MFSD12Q6NUT3 480 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 FAM180BQ6P0A1 224 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 CEACAM19Q7Z692 300 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 GPD1LQ8N335 351 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 SUMF1Q8NBK3 374 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 OR10S1Q8NGN2 331 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 CALML4Q96GE6 196 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 CYYR1Q96J86 154 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 ZNF597Q96LX8 424 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 FAM218AQ96MZ4 157 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 ZMYND12Q9H0C1 365 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.63□□□□□ -1.83
CD46-213ENST00000471987 CHKBQ9Y259 395 aa3.63□□□□□ -1.83
CD46-213ENST00000471987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 SNAP91O60641 907 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 GALR3O60755 368 aaPredicted RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 ZBED4O75132 1171 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 BAIAP3O94812 1187 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 DNASE1P24855 282 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 ELAVL4P26378 380 aaKnown RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 CLCN4P51793 760 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 ZNF75DP51815 510 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 STAT2P52630 851 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 DHODHQ02127 395 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 CREB5Q02930 508 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 HSPB3Q12988 150 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 ZNF177Q13360 481 aaPredicted RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 MCMDC2Q4G0Z9 681 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 EIPR1Q53HC9 387 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 FCRLAQ7L513 359 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 NUP54Q7Z3B4 507 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 SZRD1Q7Z422 152 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 ADCK1Q86TW2 530 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 RPAP2Q8IXW5 612 aaPredicted RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 ZNF595Q8IYB9 648 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 C17orf53Q8N3J3 647 aaPredicted RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 FAM89BQ8N5H3 189 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 OR4K1Q8NGD4 311 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 C2orf48Q96LS8 159 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 ATF6BQ99941 703 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 TEX12Q9BXU0 123 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 SLC35C2Q9NQQ7 365 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 THAP10Q9P2Z0 257 aaPredicted RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 ZNF107Q9UII5 783 aaPredicted RBP3.62□□□□□ -1.83
CD46-213ENST00000471987 CELA1Q9UNI1 258 aa3.62□□□□□ -1.83
CD46-213ENST00000471987 HCFC1P51610 2035 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 K7EQD1 137 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 RTL8CO15255 209 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 IRF2P14316 349 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 SAT1P21673 171 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 TRIM29Q14134 588 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 VITQ6UXI7 678 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 FAM43BQ6ZT52 329 aaPredicted RBP3.61□□□□□ -1.83
CD46-213ENST00000471987 NME8Q8N427 588 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 ATL1Q8WXF7 558 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 ZNF622Q969S3 477 aaKnown RBP eCLIP3.61□□□□□ -1.832e-9■□□□□ 9.2
CD46-213ENST00000471987 CCDC3Q9BQI4 270 aa3.61□□□□□ -1.83
CD46-213ENST00000471987 IGLV4-3A0A075B6K6 122 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 TRBV5-5A0A0J9YX44 114 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 NPIPB9F8W1W9 429 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 MPZP25189 248 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 LMAN1P49257 510 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 VAMP7P51809 220 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 MAPK12P53778 367 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 TRA2BP62995 288 aaKnown RBP3.6□□□□□ -1.83
CD46-213ENST00000471987 ITGA7Q13683 1181 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 PCLAFQ15004 111 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 CBWD6Q4V339 395 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 CBWD3Q5JTY5 395 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 GARNL3Q5VVW2 1013 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 C3P1Q6ZMU1 363 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 MAATS1Q7Z4T9 603 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 OR10G7Q8NGN6 311 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 OR10Q1Q8NGQ4 319 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 NAP1L2Q9ULW6 460 aaPredicted RBP3.6□□□□□ -1.83
CD46-213ENST00000471987 STYXL1Q9Y6J8 313 aa3.6□□□□□ -1.83
CD46-213ENST00000471987 ATRXP46100 2492 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 A6NCN8 305 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 G3V2L1 256 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 CREB3O43889 395 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 DOK2O60496 412 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 LRCH4O75427 683 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 ATP1B1P05026 303 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms