RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ZUFSPQ96AP4 578 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 RAD51AP1Q96B01 352 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 BARD1Q99728 777 aaKnown RBP7.7□□□□□ -1.18
USP48-207ENST00000471752 DHRS4Q9BTZ2 278 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 LRRC4CQ9HCJ2 640 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 ATP13A2Q9NQ11 1180 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 GNPTGQ9UJJ9 305 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 B3GNT3Q9Y2A9 372 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 PCDHGA10Q9Y5H3 936 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 KLK4Q9Y5K2 254 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 CACNA1DQ01668 2161 aa7.7□□□□□ -1.18
USP48-207ENST00000471752 A0A0A6YYC8 382 aaPredicted RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 WIPF3A6NGB9 483 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 TARM1B6A8C7 271 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 E7ENX8 843 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 H7BY64 318 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 I3L1I5 382 aaPredicted RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 MYO1CO00159 1063 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 PEX12O00623 359 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNHIT1O43257 154 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 NRDCO43847 1150 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 LCMT2O60294 686 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 PSIP1O75475 530 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNF189O75820 626 aaPredicted RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 SLC16A8O95907 504 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ZGLP1P0C6A0 271 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ERVK-10P10266 1014 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ERGP11308 486 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 SLC1A2P43004 574 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 MAGEA3P43357 314 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 RRADP55042 308 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 TAP2Q03519 686 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 EEF1A2Q05639 463 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 DHX34Q14147 1143 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 AARS2Q5JTZ9 985 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 PRAMEF13Q5VWM6 474 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 B3GNTL1Q67FW5 361 aaPredicted RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNF470Q6ECI4 717 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 KIAA0930Q6ICG6 404 aaPredicted RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNF425Q6IV72 752 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 CASC4Q6P4E1 433 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNF662Q6ZS27 426 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 RNF44Q7L0R7 432 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 CPNE9Q8IYJ1 553 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 RASGEF1CQ8N431 466 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 CLEC1AQ8NC01 280 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 DNAJB14Q8TBM8 379 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ASB11Q8WXH4 323 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 PEX13Q92968 403 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 MAGOHBQ96A72 148 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNF669Q96BR6 464 aaPredicted RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 THOC3Q96J01 351 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 PRAP1Q96NZ9 151 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 SERPINB12Q96P63 405 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 OR2A5Q96R48 311 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 NDNQ99608 321 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 TTC1Q99614 292 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 GPR21Q99679 349 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 PLCD4Q9BRC7 762 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 WDR83Q9BRX9 315 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 TSGA10Q9BZW7 698 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 SLC26A1Q9H2B4 701 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 MRM3Q9HC36 420 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNF160Q9HCG1 818 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ZNF304Q9HCX3 659 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 TAC3Q9UHF0 121 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 C3orf18Q9UK00 162 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 NOVA2Q9UNW9 492 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 SRPK3Q9UPE1 567 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 RUVBL1Q9Y265 456 aaKnown RBP7.69□□□□□ -1.18
USP48-207ENST00000471752 PCDHGB7Q9Y5F8 929 aa7.69□□□□□ -1.18
USP48-207ENST00000471752 DIDO1Q9BTC0 2240 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 FEZF1A0PJY2 475 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 SDR42E2A6NKP2 422 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 GFYI3L273 518 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 E2F3O00716 465 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 MAN1A2O60476 641 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 SRPX2O60687 465 aaPredicted RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 USP1O94782 785 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 SYF2O95926 243 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 LDLRP01130 860 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 ESR1P03372 595 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 CCDC175P0C221 793 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 COX6A1P12074 109 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 PNLIPRP1P54315 467 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 ARSFP54793 590 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 CDKN2DP55273 166 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 MRPS25P82663 173 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 GRM7Q14831 915 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 TMED2Q15363 201 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 RBBP7Q16576 425 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 HSP90AA5PQ58FG0 334 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 ZC3H12BQ5HYM0 836 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 RBM20Q5T481 1227 aaKnown RBP7.68□□□□□ -1.18
USP48-207ENST00000471752 ICE2Q659A1 982 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 MRNIPQ6NTE8 343 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 IGFL2Q6UWQ7 119 aa7.68□□□□□ -1.18
USP48-207ENST00000471752 VN1R4Q7Z5H5 301 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms