RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 MTFR2Q6P444 385 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 RPTNQ6XPR3 784 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 RIPOR1Q6ZS17 1223 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 RAB42Q8N4Z0 105 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 AMER3Q8N944 861 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 DNAJB8Q8NHS0 232 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 CABS1Q96KC9 395 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 TRIM8Q9BZR9 551 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 LACRTQ9GZZ8 138 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 RNF32Q9H0A6 362 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 CATSPERZQ9NTU4 200 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 C14orf105Q9NVL8 296 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 RIC8BQ9NVN3 520 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 TRPC4Q9UBN4 977 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 SH3BGRL2Q9UJC5 107 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 REXO2Q9Y3B8 237 aaKnown RBP12.43□□□□□ -0.42
PTPN7-207ENST00000468385 TCAF1Q9Y4C2 921 aa12.43□□□□□ -0.42
PTPN7-207ENST00000468385 OR5H15A6NDH6 313 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 SOWAHDA6NJG2 315 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 PTMAP06454 111 aaKnown RBP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 HEXBP07686 556 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ERVK-10P10266 1014 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 COX6B1P14854 86 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 SLC26A3P40879 764 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ADORA2A-AS1P86434 159 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 PMP22Q01453 160 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 HKDC1Q2TB90 917 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 AARS2Q5JTZ9 985 aaKnown RBP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 PTRHD1Q6GMV3 140 aaKnown RBP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 TMEM205Q6UW68 189 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 PPP1R21Q6ZMI0 780 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ARHGEF39Q8N4T4 335 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 RNF214Q8ND24 703 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 SKA2Q8WVK7 121 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 PEX13Q92968 403 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 MVB12AQ96EY5 273 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 PANX3Q96QZ0 392 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 DPH7Q9BTV6 452 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ACAT2Q9BWD1 397 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 YIPF2Q9BWQ6 316 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 TGIF2Q9GZN2 237 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ZNF700Q9H0M5 742 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 SPATA7Q9P0W8 599 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 ANAPC5Q9UJX4 755 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 PACSIN2Q9UNF0 486 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 CDC14AQ9UNH5 594 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 RUVBL1Q9Y265 456 aaKnown RBP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 MRFAP1Q9Y605 127 aa12.42□□□□□ -0.42
PTPN7-207ENST00000468385 EPN1Q9Y6I3 576 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-207ENST00000468385 F8P00451 2351 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 IGKV1-8A0A0C4DH67 115 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 A0A0U1RQJ8 604 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 CD3EAPO15446 510 aaKnown RBP12.41□□□□□ -0.42
PTPN7-207ENST00000468385 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.42
PTPN7-207ENST00000468385 FOXS1O43638 330 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 PRAMEF2O60811 474 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 UQCRHP07919 91 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 ERGP11308 486 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 RPS3P23396 243 aaKnown RBP eCLIP12.41□□□□□ -0.42
PTPN7-207ENST00000468385 CMPK1P30085 196 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 FDFT1P37268 417 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 CCNFP41002 786 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 TTPAP49638 278 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 NAA25Q14CX7 972 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 SYT16Q17RD7 645 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 CTSL3PQ5NE16 218 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 OTOAQ7RTW8 1153 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 PAQR7Q86WK9 346 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 ZC3H7AQ8IWR0 971 aaKnown RBP12.41□□□□□ -0.42
PTPN7-207ENST00000468385 CSNK1A1LQ8N752 337 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 SUN3Q8TAQ9 357 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 GSDMBQ8TAX9 411 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 MMABQ96EY8 250 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-207ENST00000468385 MRFAP1L1Q96HT8 127 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 IMMP1LQ96LU5 166 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 PLCD4Q9BRC7 762 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 MKKSQ9NPJ1 570 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-207ENST00000468385 CHRAC1Q9NRG0 131 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 GNPTGQ9UJJ9 305 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 AMFRQ9UKV5 643 aa12.41□□□□□ -0.42
PTPN7-207ENST00000468385 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 KPNA5O15131 536 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 PHF2O75151 1096 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 VPS26AO75436 327 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 KRT38O76015 456 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 ICAM2P13598 275 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 STIP1P31948 543 aaKnown RBP12.4□□□□□ -0.42
PTPN7-207ENST00000468385 RBPJQ06330 500 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 ZNF33BQ06732 778 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 GBX1Q14549 363 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 CDSNQ15517 529 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 OASLQ15646 514 aaKnown RBP12.4□□□□□ -0.42
PTPN7-207ENST00000468385 C3AR1Q16581 482 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.4□□□□□ -0.42
PTPN7-207ENST00000468385 ABHD17BQ5VST6 288 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 GARNL3Q5VVW2 1013 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 LRRC8BQ6P9F7 803 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms