RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TIAF1O95411 115 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 CCND1P24385 295 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 RAB15P59190 212 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 ABATP80404 500 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 IFFO1Q0D2I5 559 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 DEFB110Q30KQ9 67 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 THOC6Q86W42 341 aaKnown RBP18.18■□□□□ 0.5
LMNB1-204ENST00000463908 PAQR7Q86WK9 346 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 MCATQ8IVS2 390 aaKnown RBP18.18■□□□□ 0.5
LMNB1-204ENST00000463908 CNPY4Q8N129 248 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 OR1L3Q8NH93 324 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 HNRNPLLQ8WVV9 542 aaKnown RBP18.18■□□□□ 0.5
LMNB1-204ENST00000463908 EXT2Q93063 718 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 RNF31Q96EP0 1072 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 PRAP1Q96NZ9 151 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 PLCD4Q9BRC7 762 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 ASPSCR1Q9BZE9 553 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 NUDT4Q9NZJ9 180 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 LGALS13Q9UHV8 139 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 ASB1Q9Y576 335 aa18.18■□□□□ 0.5
LMNB1-204ENST00000463908 DMXL2Q8TDJ6 3036 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 MAP3K7O43318 606 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 KLK8O60259 260 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 RBP1P09455 135 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 ZNF28P17035 718 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 KRT15P19012 456 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 ZNF844Q08AG5 666 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 TSNAXIP1Q2TAA8 658 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 TMEM164Q5U3C3 297 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 PRAMEF17Q5VTA0 474 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 PWWP2BQ6NUJ5 590 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 C16orf46Q6P387 395 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 KLC3Q6P597 504 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 CEACAM20Q6UY09 585 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 BPHLQ86WA6 291 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-204ENST00000463908 ZFAND4Q86XD8 727 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 TCAIMQ8N3R3 496 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 MYRIPQ8NFW9 859 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 FCRL4Q96PJ5 515 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 SPRTNQ9H040 489 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-204ENST00000463908 THSD1Q9NS62 852 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 TMEM184CQ9NVA4 438 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 RARRES3Q9UL19 164 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 SNX7Q9UNH6 387 aa18.17■□□□□ 0.5
LMNB1-204ENST00000463908 ANKRD12Q6UB98 2062 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 SNRNP200O75643 2136 aaKnown RBP18.16■□□□□ 0.5
LMNB1-204ENST00000463908 SYCE1LA8MT33 242 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 SUPT3HB4E1H0 165 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 TMEM150CB9EJG8 249 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ERLIN1O75477 346 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 SUPT3HO75486 399 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 CCNDBP1O95273 360 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 HSPA7P48741 367 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 AGTR2P50052 363 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 CSNK1G2P78368 415 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.16■□□□□ 0.5
LMNB1-204ENST00000463908 FRMPD2BQ6IN97 320 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 PPP1R3BQ86XI6 285 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ABHD11Q8NFV4 315 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 FGF11Q92914 225 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 NEIL2Q969S2 332 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ZBTB9Q96C00 473 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 SCYL1Q96KG9 808 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ZIM3Q96PE6 472 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 TEFMQ96QE5 360 aaKnown RBP18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ZPBPQ9BS86 351 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 HAUS8Q9BT25 410 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 CD244Q9BZW8 370 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 CPSF2Q9P2I0 782 aaKnown RBP18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ANKMY1Q9P2S6 941 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 XPR1Q9UBH6 696 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ACSL6Q9UKU0 697 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 ZMIZ1Q9ULJ6 1067 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 PLCL2Q9UPR0 1127 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 PCM1Q15154 2024 aa18.16■□□□□ 0.5
LMNB1-204ENST00000463908 FASNP49327 2511 aaKnown RBP18.16■□□□□ 0.5
LMNB1-204ENST00000463908 DSPP15924 2871 aaKnown RBP18.16■□□□□ 0.5
LMNB1-204ENST00000463908 LOC105369274A0A096LPK9 316 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 LOC102723532A0A0G2JNH3 316 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 A0A0J9YVX5 310 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 STK16O75716 305 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 WDR47O94967 919 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 CDH1P12830 882 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 RELAQ04206 551 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 SLC18A2Q05940 514 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 PFKFB4Q16877 469 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 CATSPEREQ5SY80 951 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 TIPARPQ7Z3E1 657 aaKnown RBP18.15■□□□□ 0.5
LMNB1-204ENST00000463908 C17orf64Q86WR6 236 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 OR4N4Q8N0Y3 316 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 RIBC1Q8N443 379 aaPredicted RBP18.15■□□□□ 0.5
LMNB1-204ENST00000463908 KDF1Q8NAX2 398 aaPredicted RBP18.15■□□□□ 0.5
LMNB1-204ENST00000463908 SLC38A9Q8NBW4 561 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 OR4K1Q8NGD4 311 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 ZNF285Q96NJ3 590 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 MRPL57Q9BQC6 102 aaKnown RBP18.15■□□□□ 0.5
LMNB1-204ENST00000463908 WWOXQ9NZC7 414 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 DCDC2Q9UHG0 476 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 SERTAD3Q9UJW9 196 aa18.15■□□□□ 0.5
LMNB1-204ENST00000463908 NBEAQ8NFP9 2946 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms