RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NANOGP8Q6NSW7 305 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 CYP20A1Q6UW02 462 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 IL27RAQ6UWB1 636 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 ZBTB49Q6ZSB9 765 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 FKBP9P1Q75LS8 142 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 PARS2Q7L3T8 475 aaKnown RBP9.62□□□□□ -0.87
PTPRD-207ENST00000463477 TRIM46Q7Z4K8 759 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 SPRED1Q7Z699 444 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 MILR1Q7Z6M3 343 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 TBC1D21Q8IYX1 336 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 TCAIMQ8N3R3 496 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 GALNT4Q8N4A0 578 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 GLB1L3Q8NCI6 653 aaPredicted RBP9.62□□□□□ -0.87
PTPRD-207ENST00000463477 OR8J3Q8NGG0 315 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 SNX19Q92543 992 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 RHBDF1Q96CC6 855 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 KCTD14Q9BQ13 255 aaPredicted RBP9.62□□□□□ -0.87
PTPRD-207ENST00000463477 EDEM2Q9BV94 578 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 BOCQ9BWV1 1114 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 ACTL8Q9H568 366 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 IPPKQ9H8X2 491 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 NANOGQ9H9S0 305 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 TMEM9BQ9NQ34 198 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 ZDHHC3Q9NYG2 299 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 OPTCQ9UBM4 332 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 MAGEL2Q9UJ55 1249 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 PCDHB3Q9Y5E6 796 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 SLCO1B1Q9Y6L6 691 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 CABIN1Q9Y6J0 2220 aa9.62□□□□□ -0.87
PTPRD-207ENST00000463477 C4orf47A7E2U8 309 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 NPIPB8E9PQR5 432 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 AREL1O15033 823 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 VILLO15195 856 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 GPR39O43194 453 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 AKAP10O43572 662 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TSPAN6O43657 245 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TIPRLO75663 272 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TIMP2P16035 220 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CSNK1EP49674 416 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CCT8P50990 548 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 NR1H2P55055 460 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PPP2CBP62714 309 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PPP2CAP67775 309 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PWP1Q13610 501 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CAPRIN1Q14444 709 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 KIAA0040Q15053 153 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TEAD4Q15561 434 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CHRNA6Q15825 494 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 ATP6AP1Q15904 470 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 GGTA1PQ4G0N0 100 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 FBXO48Q5FWF7 155 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 NHSL2Q5HYW2 709 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TMTC4Q5T4D3 741 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CRTC1Q6UUV9 634 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 DLEU7Q6UYE1 221 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 USP45Q70EL2 814 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 HORMAD1Q86X24 394 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 ZSWIM9Q86XI8 627 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 SPPL2CQ8IUH8 684 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 DNAJB8Q8NHS0 232 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 HM13Q8TCT9 377 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 LKAAEAR1Q8TD35 194 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TFAP2CQ92754 450 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 USP7Q93009 1102 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 POP5Q969H6 163 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 ESAMQ96AP7 390 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 VPS33AQ96AX1 596 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PPWD1Q96BP3 646 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 DGCR14Q96DF8 476 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CNBD2Q96M20 576 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CCDC115Q96NT0 180 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 SLC29A1Q99808 456 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TMEM79Q9BSE2 394 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 HAUS8Q9BT25 410 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 SEMA6AQ9H2E6 1030 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 IL1RL2Q9HB29 575 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PNPLA3Q9NST1 481 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 DNAAF2Q9NVR5 837 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 ZFR2Q9UPR6 939 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 FNDC3AQ9Y2H6 1198 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PRSS21Q9Y6M0 314 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 A0A1W2PQU0 124 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 A0A1W2PR77 199 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 TSPAN11A1L157 253 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 SERTM1A2A2V5 107 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 NPIPB15A6NHN6 443 aaPredicted RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PRAMEF26H0Y7S4 382 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 SLC16A5O15375 505 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 KATNA1O75449 491 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PCDH8O95206 1070 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 MPC1LP0DKB6 136 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 ACPPP15309 386 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 HOXB6P17509 224 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PRPH2P23942 346 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 VARSP26640 1264 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CD38P28907 300 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 GSTT1P30711 240 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 MAT2AP31153 395 aaKnown RBP9.61□□□□□ -0.87
PTPRD-207ENST00000463477 CA5AP35218 305 aa9.61□□□□□ -0.87
PTPRD-207ENST00000463477 PEX19P40855 299 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms