RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ZNF839A8K0R7 811 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 ARHGEF33A8MVX0 844 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 CATP04040 527 aaKnown RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 CCDC175P0C221 793 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 ERVK-10P10266 1014 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 MLNP12872 115 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 PKMP14618 531 aaKnown RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 CHRM3P20309 590 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 FDXRP22570 491 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 RPA3P35244 121 aaPredicted RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 PRDX1Q06830 199 aaKnown RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 Q0VFX4 171 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 MFAP5Q13361 173 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 FASTKQ14296 549 aaKnown RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 ZNF169Q14929 603 aaPredicted RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 GARNL3Q5VVW2 1013 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 CES3Q6UWW8 571 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 SHISA6Q6ZSJ9 500 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 CENPUQ71F23 418 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 KCNMB4Q86W47 210 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 PAQR7Q86WK9 346 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 PARP9Q8IXQ6 854 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 THOC3Q96J01 351 aaKnown RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 MRPS30Q9NP92 439 aaKnown RBP17.03■□□□□ 0.32
SSB-206ENST00000461708 C3orf18Q9UK00 162 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 CRYL1Q9Y2S2 319 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 CSAG2Q9Y5P2 127 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 TCRBV7S3A2A0A539 114 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 GOLGA8KD6RF30 607 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 H0YGG7 62 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 GOLGA8TH3BQL2 631 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 TXNDC9O14530 226 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 MAP2K7O14733 419 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 NRP2O60462 931 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 ALOX12BO75342 701 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 USP1O94782 785 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 CCNDBP1O95273 360 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 EIF2S1P05198 315 aaKnown RBP17.02■□□□□ 0.32
SSB-206ENST00000461708 FBLP22087 321 aaKnown RBP17.02■□□□□ 0.32
SSB-206ENST00000461708 CLCN7P51798 805 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 ARF3P61204 181 aaPredicted RBP17.02■□□□□ 0.32
SSB-206ENST00000461708 ABATP80404 500 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 KLHL38Q2WGJ6 581 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 TTLL9Q3SXZ7 439 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 ACSBG2Q5FVE4 666 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 HIST2H2BCQ6DN03 193 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 ZNF425Q6IV72 752 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 RPUSD3Q6P087 351 aaKnown RBP17.02■□□□□ 0.32
SSB-206ENST00000461708 NDUFAF7Q7L592 441 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 DTWD1Q8N5C7 304 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 METTL27Q8N6F8 245 aaPredicted RBP17.02■□□□□ 0.32
SSB-206ENST00000461708 PRELID2Q8N945 189 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 TGIF2Q9GZN2 237 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 LZTFL1Q9NQ48 299 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 C14orf105Q9NVL8 296 aa17.02■□□□□ 0.32
SSB-206ENST00000461708 IGKV1-8A0A0C4DH67 115 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 E5RI56 91 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 CEP104O60308 925 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 EDN3P14138 238 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 EZRP15311 586 aaKnown RBP17.01■□□□□ 0.31
SSB-206ENST00000461708 SLC26A3P40879 764 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 PNLIPRP1P54315 467 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 YBX1P67809 324 aaKnown RBP17.01■□□□□ 0.31
SSB-206ENST00000461708 ICE2Q659A1 982 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 CAND1Q86VP6 1230 aaKnown RBP17.01■□□□□ 0.31
SSB-206ENST00000461708 LURAP1LQ8IV03 231 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 LMNTD2Q8IXW0 634 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 KBTBD2Q8IY47 623 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 CSNK1A1LQ8N752 337 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 MCUQ8NE86 351 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 GRHL3Q8TE85 626 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 FAR1Q8WVX9 515 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 KCNJ9Q92806 393 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 OR2A5Q96R48 311 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 TRIM56Q9BRZ2 755 aaKnown RBP17.01■□□□□ 0.31
SSB-206ENST00000461708 ACAT2Q9BWD1 397 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
SSB-206ENST00000461708 SAMD15Q9P1V8 674 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 GALPQ9UBC7 116 aa17.01■□□□□ 0.31
SSB-206ENST00000461708 A1L4Q6 167 aa17■□□□□ 0.31
SSB-206ENST00000461708 SDR42E2A6NKP2 422 aa17■□□□□ 0.31
SSB-206ENST00000461708 AVILO75366 819 aa17■□□□□ 0.31
SSB-206ENST00000461708 CLDN1O95832 211 aa17■□□□□ 0.31
SSB-206ENST00000461708 SLC16A8O95907 504 aa17■□□□□ 0.31
SSB-206ENST00000461708 SERPINA7P05543 415 aa17■□□□□ 0.31
SSB-206ENST00000461708 ENO3P13929 434 aaPredicted RBP17■□□□□ 0.31
SSB-206ENST00000461708 CDC16Q13042 620 aa17■□□□□ 0.31
SSB-206ENST00000461708 GPS1Q13098 491 aa17■□□□□ 0.31
SSB-206ENST00000461708 VWA2Q5GFL6 755 aa17■□□□□ 0.31
SSB-206ENST00000461708 CASC4Q6P4E1 433 aa17■□□□□ 0.31
SSB-206ENST00000461708 SUSD1Q6UWL2 747 aa17■□□□□ 0.31
SSB-206ENST00000461708 REXO1L1PQ8IX06 675 aa17■□□□□ 0.31
SSB-206ENST00000461708 ARHGEF39Q8N4T4 335 aa17■□□□□ 0.31
SSB-206ENST00000461708 ASB11Q8WXH4 323 aa17■□□□□ 0.31
SSB-206ENST00000461708 RERGQ96A58 199 aaPredicted RBP17■□□□□ 0.31
SSB-206ENST00000461708 FAM136AQ96C01 138 aa17■□□□□ 0.31
SSB-206ENST00000461708 PKP4Q99569 1192 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms