RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 KLC3Q6P597 504 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 CEACAM20Q6UY09 585 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 THOC6Q86W42 341 aaKnown RBP13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ZFAND4Q86XD8 727 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 KLHDC8AQ8IYD2 350 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 IQCKQ8N0W5 287 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM151AQ8N4L1 468 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 MYRIPQ8NFW9 859 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ACMSDQ8TDX5 336 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ZUFSPQ96AP4 578 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 SCYL1Q96KG9 808 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ZNF578Q96N58 590 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ZIM3Q96PE6 472 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 FCRL4Q96PJ5 515 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 PLCD4Q9BRC7 762 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 DDA1Q9BW61 102 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ROPN1BQ9BZX4 212 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-229ENST00000460826 ROPN1Q9HAT0 212 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-229ENST00000460826 WWOXQ9NZC7 414 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM216Q9P0N5 145 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 XPR1Q9UBH6 696 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 DKK4Q9UBT3 224 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 RARRES3Q9UL19 164 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 SLC22A14Q9Y267 594 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 PCDHGA7Q9Y5G6 932 aa13.44□□□□□ -0.26
HDLBP-229ENST00000460826 USP24Q9UPU5 2620 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 ZFHX4Q86UP3 3567 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 LRRC14BA6NHZ5 514 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 H3BMH7 237 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 H7BY64 318 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 TK2O00142 265 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 MAP2K7O14733 419 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 HAT1O14929 419 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 S100BP04271 92 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-229ENST00000460826 MSL3P1P0C860 447 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 ZNF28P17035 718 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 GGT5P36269 586 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 AGTR2P50052 363 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 IL11RAQ14626 422 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 PWWP2BQ6NUJ5 590 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 FBXO42Q6P3S6 717 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 C17orf64Q86WR6 236 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 PPP1R3BQ86XI6 285 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 PLD3Q8IV08 490 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 C4orf33Q8N1A6 199 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 TCAIMQ8N3R3 496 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 RIBC1Q8N443 379 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-229ENST00000460826 TSNARE1Q96NA8 513 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 PRAP1Q96NZ9 151 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 SPRY4Q9C004 299 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 SPRTNQ9H040 489 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-229ENST00000460826 PCBD2Q9H0N5 130 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 THSD1Q9NS62 852 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 CPSF2Q9P2I0 782 aaKnown RBP13.43□□□□□ -0.26
HDLBP-229ENST00000460826 PILRAQ9UKJ1 303 aa13.43□□□□□ -0.26
HDLBP-229ENST00000460826 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 A0A0J9YVX5 310 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 CCDC189A1A4V9 331 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 SYCE1LA8MT33 242 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 TAF4O00268 1085 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 MAP3K7O43318 606 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 KLK8O60259 260 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 STK16O75716 305 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 WDR47O94967 919 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 RBP1P09455 135 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 CSNK1G2P78368 415 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 MEF2AQ02078 507 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 KRT71Q3SY84 523 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 CATSPEREQ5SY80 951 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM164Q5U3C3 297 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 FRMPD2BQ6IN97 320 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 RNF44Q7L0R7 432 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 ADCK2Q7Z695 626 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 TRABD2AQ86V40 505 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 MCATQ8IVS2 390 aaKnown RBP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 UBTD2Q8WUN7 234 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 HNRNPLLQ8WVV9 542 aaKnown RBP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 NEIL2Q969S2 332 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 TEFMQ96QE5 360 aaKnown RBP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 MRPL57Q9BQC6 102 aaKnown RBP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 HAUS8Q9BT25 410 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 ASPSCR1Q9BZE9 553 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 B3GNT4Q9C0J1 378 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 SPNS1Q9H2V7 528 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 MRPL46Q9H2W6 279 aaKnown RBP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 C12orf65Q9H3J6 166 aaKnown RBP13.42□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM184CQ9NVA4 438 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 ANKMY1Q9P2S6 941 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 EMCNQ9ULC0 261 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 SNX7Q9UNH6 387 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 PLCL2Q9UPR0 1127 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 SCN3AQ9NY46 2000 aa13.42□□□□□ -0.26
HDLBP-229ENST00000460826 LOC105369274A0A096LPK9 316 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 LOC102723532A0A0G2JNH3 316 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 TEX51A0A1B0GUA7 166 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 CCNT2O60583 730 aaKnown RBP13.41□□□□□ -0.26
HDLBP-229ENST00000460826 PRAMEF4O60810 478 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 IPO13O94829 963 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms