RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GSTM1P09488 218 aa10□□□□□ -0.81
USP39-210ENST00000459775 SLC35G4P0C7Q5 338 aa10□□□□□ -0.81
USP39-210ENST00000459775 KITP10721 976 aa10□□□□□ -0.81
USP39-210ENST00000459775 CDK4P11802 303 aa10□□□□□ -0.81
USP39-210ENST00000459775 CTSEP14091 401 aa10□□□□□ -0.81
USP39-210ENST00000459775 PRDX3P30048 256 aaKnown RBP10□□□□□ -0.81
USP39-210ENST00000459775 GSTM4Q03013 218 aa10□□□□□ -0.81
USP39-210ENST00000459775 ILF2Q12905 390 aaKnown RBP10□□□□□ -0.81
USP39-210ENST00000459775 BNIP3Q12983 259 aa10□□□□□ -0.81
USP39-210ENST00000459775 STX3Q13277 289 aa10□□□□□ -0.81
USP39-210ENST00000459775 TSTA3Q13630 321 aaPredicted RBP10□□□□□ -0.81
USP39-210ENST00000459775 PTK2BQ14289 1009 aa10□□□□□ -0.81
USP39-210ENST00000459775 FASTKQ14296 549 aaKnown RBP10□□□□□ -0.81
USP39-210ENST00000459775 GRB7Q14451 532 aa10□□□□□ -0.81
USP39-210ENST00000459775 NDUFAF5Q5TEU4 345 aa10□□□□□ -0.81
USP39-210ENST00000459775 LIPMQ5VYY2 423 aa10□□□□□ -0.81
USP39-210ENST00000459775 CGB2Q6NT52 195 aa10□□□□□ -0.81
USP39-210ENST00000459775 TLDC1Q6P9B6 456 aa10□□□□□ -0.81
USP39-210ENST00000459775 TAF8Q7Z7C8 310 aa10□□□□□ -0.81
USP39-210ENST00000459775 ZNF761Q86XN6 746 aaPredicted RBP10□□□□□ -0.81
USP39-210ENST00000459775 RASGRP3Q8IV61 690 aa10□□□□□ -0.81
USP39-210ENST00000459775 LMX1AQ8TE12 382 aa10□□□□□ -0.81
USP39-210ENST00000459775 RHBDF1Q96CC6 855 aa10□□□□□ -0.81
USP39-210ENST00000459775 VPS50Q96JG6 964 aa10□□□□□ -0.81
USP39-210ENST00000459775 FERD3LQ96RJ6 166 aa10□□□□□ -0.81
USP39-210ENST00000459775 PITPNM3Q9BZ71 974 aa10□□□□□ -0.81
USP39-210ENST00000459775 IL21RQ9HBE5 538 aa10□□□□□ -0.81
USP39-210ENST00000459775 NKIRAS2Q9NYR9 191 aa10□□□□□ -0.81
USP39-210ENST00000459775 ANKRD12Q6UB98 2062 aa10□□□□□ -0.81
USP39-210ENST00000459775 TMEM247A6NEH6 219 aa10□□□□□ -0.81
USP39-210ENST00000459775 VILLO15195 856 aa10□□□□□ -0.81
USP39-210ENST00000459775 ZW10O43264 779 aa10□□□□□ -0.81
USP39-210ENST00000459775 SMIM24O75264 130 aa10□□□□□ -0.81
USP39-210ENST00000459775 CFIP05156 583 aa10□□□□□ -0.81
USP39-210ENST00000459775 VCLP18206 1134 aa10□□□□□ -0.81
USP39-210ENST00000459775 IDSP22304 550 aa10□□□□□ -0.81
USP39-210ENST00000459775 NUDT1P36639 197 aa10□□□□□ -0.81
USP39-210ENST00000459775 SLC1A6P48664 564 aa10□□□□□ -0.81
USP39-210ENST00000459775 KPNA2P52292 529 aaKnown RBP10□□□□□ -0.81
USP39-210ENST00000459775 C21orf59P57076 290 aa10□□□□□ -0.81
USP39-210ENST00000459775 CACNA1BQ00975 2339 aa10□□□□□ -0.81
USP39-210ENST00000459775 MLC1Q15049 377 aa10□□□□□ -0.81
USP39-210ENST00000459775 RPE65Q16518 533 aa10□□□□□ -0.81
USP39-210ENST00000459775 ARL13AQ5H913 290 aaPredicted RBP10□□□□□ -0.81
USP39-210ENST00000459775 ZNF678Q5SXM1 525 aa10□□□□□ -0.81
USP39-210ENST00000459775 TCEAL6Q6IPX3 200 aa10□□□□□ -0.81
USP39-210ENST00000459775 TMEM53Q6P2H8 277 aa10□□□□□ -0.81
USP39-210ENST00000459775 SUSD1Q6UWL2 747 aa10□□□□□ -0.81
USP39-210ENST00000459775 SYTL1Q8IYJ3 562 aa10□□□□□ -0.81
USP39-210ENST00000459775 FAM46DQ8NEK8 389 aa10□□□□□ -0.81
USP39-210ENST00000459775 OR6Y1Q8NGX8 325 aa10□□□□□ -0.81
USP39-210ENST00000459775 RDH11Q8TC12 318 aa10□□□□□ -0.81
USP39-210ENST00000459775 GPBAR1Q8TDU6 330 aa10□□□□□ -0.81
USP39-210ENST00000459775 TCEAL3Q969E4 200 aa10□□□□□ -0.81
USP39-210ENST00000459775 MAELQ96JY0 434 aaKnown RBP10□□□□□ -0.81
USP39-210ENST00000459775 CDK15Q96Q40 435 aa10□□□□□ -0.81
USP39-210ENST00000459775 SORT1Q99523 831 aa10□□□□□ -0.81
USP39-210ENST00000459775 DPEP2Q9H4A9 486 aa10□□□□□ -0.81
USP39-210ENST00000459775 ZBTB26Q9HCK0 441 aa10□□□□□ -0.81
USP39-210ENST00000459775 SEMA4BQ9NPR2 832 aaPredicted RBP10□□□□□ -0.81
USP39-210ENST00000459775 PNPOQ9NVS9 261 aa10□□□□□ -0.81
USP39-210ENST00000459775 TAAR2Q9P1P5 351 aa10□□□□□ -0.81
USP39-210ENST00000459775 DNMT3AQ9Y6K1 912 aaPredicted RBP10□□□□□ -0.81
USP39-210ENST00000459775 CEP192Q8TEP8 1941 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 F8W8V4 182 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 CASC3O15234 703 aaKnown RBP9.99□□□□□ -0.81
USP39-210ENST00000459775 KLK8O60259 260 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 CCNT2O60583 730 aaKnown RBP9.99□□□□□ -0.81
USP39-210ENST00000459775 SHOX2O60902 331 aaPredicted RBP9.99□□□□□ -0.81
USP39-210ENST00000459775 CSF2P04141 144 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 C8GP07360 202 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 IMPDH1P20839 514 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 MPSTP25325 297 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 MAP4P27816 1152 aaKnown RBP9.99□□□□□ -0.81
USP39-210ENST00000459775 HERVK_113P63132 956 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 DAB2P98082 770 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 ILF3Q12906 894 aaKnown RBP eCLIP9.99□□□□□ -0.815e-9■■■■■ 33.1
USP39-210ENST00000459775 STK11Q15831 433 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 DEFB133Q30KQ1 61 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 UAP1L1Q3KQV9 507 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 PRR23CQ6ZRP0 262 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 FAM20CQ8IXL6 584 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 COL26A1Q96A83 441 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 ERVK-6Q9BXR3 956 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 GSTO2Q9H4Y5 243 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 PARD6AQ9NPB6 346 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 TRNAU1APQ9NX07 287 aaKnown RBP9.99□□□□□ -0.81
USP39-210ENST00000459775 PTBP2Q9UKA9 531 aaKnown RBP9.99□□□□□ -0.81
USP39-210ENST00000459775 FIS1Q9Y3D6 152 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 OTOGLQ3ZCN5 2332 aa9.99□□□□□ -0.81
USP39-210ENST00000459775 TDRD6O60522 2096 aaKnown RBP9.99□□□□□ -0.81
USP39-210ENST00000459775 SERTM1A2A2V5 107 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SYCE1LA8MT33 242 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 B4DGG1 531 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SULT1B1O43704 296 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CATP04040 527 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 SERPINE1P05121 402 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 HIST1H2AGP0C0S8 130 aaPredicted RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 NME1P15531 152 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 HIST1H2ADP20671 130 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms