RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 NCF4Q15080 339 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 UAP1Q16222 522 aaPredicted RBP17.89■□□□□ 0.45
USP39-209ENST00000458268 TCTE1Q5JU00 501 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 TMEM207Q6UWW9 146 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 FRA10AC1Q70Z53 315 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 SYVN1Q86TM6 617 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 CEP97Q8IW35 865 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 LSM14AQ8ND56 463 aaKnown RBP17.89■□□□□ 0.45
USP39-209ENST00000458268 FBF1Q8TES7 1133 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.89■□□□□ 0.45
USP39-209ENST00000458268 APOBEC4Q8WW27 367 aaKnown RBP17.89■□□□□ 0.45
USP39-209ENST00000458268 PYCR2Q96C36 320 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 WBP1Q96G27 269 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 CABS1Q96KC9 395 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 EGFL8Q99944 293 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 PLCD4Q9BRC7 762 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 NLNQ9BYT8 704 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 IKZF3Q9UKT9 509 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 TCFL5Q9UL49 500 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 PTRH2Q9Y3E5 179 aaKnown RBP17.89■□□□□ 0.45
USP39-209ENST00000458268 MAU2Q9Y6X3 613 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 PIEZO2Q9H5I5 2752 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 LOC400499M0QZD8 3231 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 OR2A25A4D2G3 310 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 ARGFXA6NJG6 315 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 H3BMH7 237 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 H7BY64 318 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 TK2O00142 265 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 CDC7O00311 574 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 HAT1O14929 419 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 SLC16A5O15375 505 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 FAM155BO75949 473 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 C1QL1O75973 258 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 ZNF37AP17032 561 aaPredicted RBP17.88■□□□□ 0.45
USP39-209ENST00000458268 STX2P32856 288 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 ARSFP54793 590 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 PRDX1Q06830 199 aaKnown RBP17.88■□□□□ 0.45
USP39-209ENST00000458268 C19orf57Q0VDD7 668 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 KCNAB2Q13303 367 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 KBTBD12Q3ZCT8 623 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 NKAIN1Q4KMZ8 207 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 RNF44Q7L0R7 432 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 PAQR7Q86WK9 346 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 SPATA6LQ8N4H0 392 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 MMGT1Q8N4V1 131 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 NKAPQ8N5F7 415 aaKnown RBP17.88■□□□□ 0.45
USP39-209ENST00000458268 PROKR1Q8TCW9 393 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 PRAP1Q96NZ9 151 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 GBP5Q96PP8 586 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 CPNE1Q99829 537 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 DPH2Q9BQC3 489 aaPredicted RBP17.88■□□□□ 0.45
USP39-209ENST00000458268 LRRC4CQ9HCJ2 640 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 MTRF1LQ9UGC7 380 aaKnown RBP17.88■□□□□ 0.45
USP39-209ENST00000458268 DMGDHQ9UI17 866 aaKnown RBP17.88■□□□□ 0.45
USP39-209ENST00000458268 PADI2Q9Y2J8 665 aa17.88■□□□□ 0.45
USP39-209ENST00000458268 IGKV1-8A0A0C4DH67 115 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 A0A1B0GX78 115 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 FAM159BA6NKW6 160 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 H0YGG7 62 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 CAPN1P07384 714 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 GSTA2P09210 222 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 RAB40ALP0C0E4 278 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 GP5P40197 560 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 FOLR3P41439 243 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 OR1D4P47884 311 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 ARF3P61204 181 aaPredicted RBP17.87■□□□□ 0.45
USP39-209ENST00000458268 UGT8Q16880 541 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 ZNF385CQ66K41 422 aaPredicted RBP17.87■□□□□ 0.45
USP39-209ENST00000458268 ZNF517Q6ZMY9 492 aaPredicted RBP17.87■□□□□ 0.45
USP39-209ENST00000458268 SHISA6Q6ZSJ9 500 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 C17orf64Q86WR6 236 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 LRRC56Q8IYG6 542 aaPredicted RBP17.87■□□□□ 0.45
USP39-209ENST00000458268 ZNF843Q8N446 348 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 EXT2Q93063 718 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 RERGQ96A58 199 aaPredicted RBP17.87■□□□□ 0.45
USP39-209ENST00000458268 TSPAN17Q96FV3 270 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 RBBP8Q99708 897 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 YIPF2Q9BWQ6 316 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 ZNF71Q9NQZ8 489 aaPredicted RBP17.87■□□□□ 0.45
USP39-209ENST00000458268 CTNNAL1Q9UBT7 734 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 SH2B3Q9UQQ2 575 aa17.87■□□□□ 0.45
USP39-209ENST00000458268 HYKKA2RU49 373 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 NCF1BA6NI72 391 aaPredicted RBP17.86■□□□□ 0.45
USP39-209ENST00000458268 NCF1CA8MVU1 366 aaPredicted RBP17.86■□□□□ 0.45
USP39-209ENST00000458268 DSCR3O14972 297 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 SRPX2O60687 465 aaPredicted RBP17.86■□□□□ 0.45
USP39-209ENST00000458268 DNAJB5O75953 348 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 TUBB4AP04350 444 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 CDH1P12830 882 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 NCF1P14598 390 aaPredicted RBP17.86■□□□□ 0.45
USP39-209ENST00000458268 ABATP80404 500 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 TSNQ15631 228 aaKnown RBP17.86■□□□□ 0.45
USP39-209ENST00000458268 HKDC1Q2TB90 917 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 CPZQ66K79 652 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 CAPN13Q6MZZ7 669 aaPredicted RBP17.86■□□□□ 0.45
USP39-209ENST00000458268 FBXO42Q6P3S6 717 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 RAPH1Q70E73 1250 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 PRSS58Q8IYP2 241 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 CSNK1A1LQ8N752 337 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 ANKRD49Q8WVL7 239 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms