RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FAM83EQ2M2I3 478 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 TAF1BQ53T94 588 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-206ENST00000457035 CDKL4Q5MAI5 379 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 TMTC4Q5T4D3 741 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 TMEM164Q5U3C3 297 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 ICE2Q659A1 982 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 FBXO42Q6P3S6 717 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 CEACAM20Q6UY09 585 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 SH2D5Q6ZV89 423 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 BPHLQ86WA6 291 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-206ENST00000457035 GPSM1Q86YR5 675 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 CNPY4Q8N129 248 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 OR2W6PQ8NHA6 318 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 RHEBL1Q8TAI7 183 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 ATL1Q8WXF7 558 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 PYCR2Q96C36 320 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 TEFMQ96QE5 360 aaKnown RBP9.66□□□□□ -0.86
ATG4A-206ENST00000457035 OR4K3Q96R72 315 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 ATOH8Q96SQ7 321 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 ZPBPQ9BS86 351 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 DPH7Q9BTV6 452 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 ASPSCR1Q9BZE9 553 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 VPS11Q9H270 941 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 ALG9Q9H6U8 611 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 PPCSQ9HAB8 311 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 MRPS30Q9NP92 439 aaKnown RBP9.66□□□□□ -0.86
ATG4A-206ENST00000457035 THSD1Q9NS62 852 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 SOHLH2Q9NX45 425 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 PSMC3IPQ9P2W1 217 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-206ENST00000457035 TBK1Q9UHD2 729 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 TAC3Q9UHF0 121 aa9.66□□□□□ -0.86
ATG4A-206ENST00000457035 PTBP2Q9UKA9 531 aaKnown RBP9.66□□□□□ -0.86
ATG4A-206ENST00000457035 A0A1W2PPM1 405 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 OR2A25A4D2G3 310 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 FOXO6A8MYZ6 492 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 H3BMH7 237 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 MAP2K7O14733 419 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 NRP2O60462 931 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 CTSVO60911 334 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 TIAF1O95411 115 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 CTSBP07858 339 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 CCND1P24385 295 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 CMPK1P30085 196 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SLCO1A2P46721 670 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SLC6A12P48065 614 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 HNMTP50135 292 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 TBPL1P62380 186 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 ABATP80404 500 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 TUBB3Q13509 450 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 C18orf21Q32NC0 220 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 PTCHD3Q3KNS1 767 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 ZNF425Q6IV72 752 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 CAPN13Q6MZZ7 669 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 LCTLQ6UWM7 567 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 PAQR7Q86WK9 346 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 PPP1R3BQ86XI6 285 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 KLHDC8AQ8IYD2 350 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 IQCKQ8N0W5 287 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 TMEM151AQ8N4L1 468 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 OR8K5Q8NH50 307 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 OR1L3Q8NH93 324 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 EPS8L3Q8TE67 593 aaKnown RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 MED8Q96G25 268 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 FCRL4Q96PJ5 515 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 EGFL8Q99944 293 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 PLCD4Q9BRC7 762 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 ROPN1BQ9BZX4 212 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 PCBD2Q9H0N5 130 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 ROPN1Q9HAT0 212 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SLC6A20Q9NP91 592 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 CCDC177Q9NQR7 707 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 ABCF3Q9NUQ8 709 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 CUEDC1Q9NWM3 386 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SERTAD3Q9UJW9 196 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 PILRAQ9UKJ1 303 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 RARRES3Q9UL19 164 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 RNF112Q9ULX5 631 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SNX7Q9UNH6 387 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SH2B3Q9UQQ2 575 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 SLC22A14Q9Y267 594 aa9.65□□□□□ -0.86
ATG4A-206ENST00000457035 PABPN1LA6NDY0 278 aaKnown RBP9.64□□□□□ -0.87
ATG4A-206ENST00000457035 NCF1BA6NI72 391 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-206ENST00000457035 NCF1CA8MVU1 366 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-206ENST00000457035 TMEM150CB9EJG8 249 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-206ENST00000457035 H7BY64 318 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 UBXN8O00124 270 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 CTIFO43310 598 aaKnown RBP9.64□□□□□ -0.87
ATG4A-206ENST00000457035 KLK8O60259 260 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 KERAO60938 352 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 CDH16O75309 829 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 CCNDBP1O95273 360 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 SBK3P0C264 359 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 NCF1P14598 390 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-206ENST00000457035 CD46P15529 392 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF28P17035 718 aa9.64□□□□□ -0.87
ATG4A-206ENST00000457035 HRH2P25021 359 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms