RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 MS4A13Q5J8X5 152 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 LRIF1Q5T3J3 769 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 PDE12Q6L8Q7 609 aaKnown RBP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 SBSNQ6UWP8 590 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 GLT6D1Q7Z4J2 308 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 NLRP8Q86W28 1048 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 LAX1Q8IWV1 398 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 FAM217AQ8IXS0 508 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ZNF683Q8IZ20 524 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TMEM86AQ8N2M4 240 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TMEM132CQ8N3T6 1108 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 STX19Q8N4C7 294 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 VANGL1Q8TAA9 524 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 SNAPC3Q92966 411 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 LPPQ93052 612 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TRIM63Q969Q1 353 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 RMDN1Q96DB5 314 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 RNF31Q96EP0 1072 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TPD52L3Q96J77 140 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 MAP6Q96JE9 813 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 EXOC2Q96KP1 924 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TSSK3Q96PN8 268 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 BBS2Q9BXC9 721 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 BARHL1Q9BZE3 327 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ZYG11BQ9C0D3 744 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 KCNH6Q9H252 994 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 LRTM1Q9HBL6 345 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 PRDM5Q9NQX1 630 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 PCDHGB2Q9Y5G2 931 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 V9GYH0 126 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 C12orf71A8MTZ7 269 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 E9PQ18 207 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 HAS3O00219 553 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 WNT9AO14904 365 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TAPBPO15533 448 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 FFAR2O15552 330 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 AOC2O75106 756 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ULK1O75385 1050 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 SEMG1P04279 462 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 MMP3P08254 477 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 IL7P13232 177 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 IFI30P13284 250 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 CBLP22681 906 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 OR3A3P47888 321 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 PCBP2Q15366 365 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 SLC39A12Q504Y0 691 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 C10orf62Q5T681 223 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 SDHAF4Q5VUM1 108 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 AFTPHQ6ULP2 937 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 PRR23CQ6ZRP0 262 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ZSWIM9Q86XI8 627 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 OR10T2Q8NGX3 314 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 UBASH3BQ8TF42 649 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ASB15Q8WXK1 588 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 COQ8BQ96D53 544 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ABCB8Q9NUT2 735 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 RLIMQ9NVW2 624 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 FKBP14Q9NWM8 211 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 CFL2Q9Y281 166 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 PCM1Q15154 2024 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ANKRD36A6QL64 1941 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 GPX5O75715 221 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 FHP07954 510 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 RHOQP17081 205 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 HOXB9P17482 250 aaPredicted RBP10□□□□□ -0.81
CLIP4-208ENST00000456385 HMGB2P26583 209 aaKnown RBP10□□□□□ -0.81
CLIP4-208ENST00000456385 MC4RP32245 332 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 S100A3P33764 101 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 KDELR2P33947 212 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 TIE1P35590 1138 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 GGT2P36268 569 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 RPS19P39019 145 aaKnown RBP10□□□□□ -0.81
CLIP4-208ENST00000456385 PBX3P40426 434 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 SNRPD2P62316 118 aaKnown RBP10□□□□□ -0.81
CLIP4-208ENST00000456385 CSNK2BP67870 215 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 SMARCB1Q12824 385 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 HYAL2Q12891 473 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 ZNF235Q14590 738 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 INO80DQ53TQ3 878 aaPredicted RBP10□□□□□ -0.81
CLIP4-208ENST00000456385 ZRANB3Q5FWF4 1079 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 FBXL22Q6P050 247 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 SYCE2Q6PIF2 218 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 PAMR1Q6UXH9 720 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 FAM124AQ86V42 546 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 ATCAYQ86WG3 371 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 FAM20CQ8IXL6 584 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 PAF1Q8N7H5 531 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 SPERTQ8NA61 448 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 FLCNQ8NFG4 579 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 ST13P5Q8NFI4 369 aaPredicted RBP10□□□□□ -0.81
CLIP4-208ENST00000456385 ANGPTL6Q8NI99 470 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 MYEOVQ96EZ4 313 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 COL21A1Q96P44 957 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 TRIB3Q96RU7 358 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 FEVQ99581 238 aa10□□□□□ -0.81
CLIP4-208ENST00000456385 COQ7Q99807 217 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms