RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 LRRC8EQ6NSJ5 796 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 FIGLAQ6QHK4 219 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 NEK10Q6ZWH5 1172 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 COX15Q7KZN9 410 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 ANKMY2Q8IV38 441 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 CISD2Q8N5K1 135 aaKnown RBP12.38□□□□□ -0.43
TREX1-203ENST00000456089 CLEC1AQ8NC01 280 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 OR9A1PQ8NGU1 263 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 PNPLA2Q96AD5 504 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 PWWP2AQ96N64 755 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 GPR21Q99679 349 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
TREX1-203ENST00000456089 CHRNA10Q9GZZ6 450 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 RAB17Q9H0T7 212 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 SOX17Q9H6I2 414 aaPredicted RBP12.38□□□□□ -0.43
TREX1-203ENST00000456089 ZNF552Q9H707 407 aaPredicted RBP12.38□□□□□ -0.43
TREX1-203ENST00000456089 ASF1BQ9NVP2 202 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 TAS2R13Q9NYV9 303 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 SPATA7Q9P0W8 599 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 GALPQ9UBC7 116 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 SRPK3Q9UPE1 567 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 DHRS7Q9Y394 339 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 CSAG2Q9Y5P2 127 aa12.38□□□□□ -0.43
TREX1-203ENST00000456089 FANCGO15287 622 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 CTSVO60911 334 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 MPC1LP0DKB6 136 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 RPA3P35244 121 aaPredicted RBP12.37□□□□□ -0.43
TREX1-203ENST00000456089 RPL21P46778 160 aaKnown RBP12.37□□□□□ -0.43
TREX1-203ENST00000456089 GCGRP47871 477 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 MRPS25P82663 173 aaKnown RBP12.37□□□□□ -0.43
TREX1-203ENST00000456089 GBX1Q14549 363 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 MYBPC3Q14896 1274 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 NAA25Q14CX7 972 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 NR6A1Q15406 480 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 CYP2A13Q16696 494 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 C4orf17Q53FE4 359 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 ZC3H12BQ5HYM0 836 aaKnown RBP12.37□□□□□ -0.43
TREX1-203ENST00000456089 FRMPD2BQ6IN97 320 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 ZNF549Q6P9A3 640 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 IGDCC3Q8IVU1 814 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 GPATCH11Q8N954 259 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 FBXO36Q8NEA4 188 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 PTERQ96BW5 349 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 SNRNP40Q96DI7 357 aaKnown RBP12.37□□□□□ -0.43
TREX1-203ENST00000456089 FER1L6-AS2Q96M78 137 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 C16orf45Q96MC5 204 aaPredicted RBP12.37□□□□□ -0.43
TREX1-203ENST00000456089 NDNQ99608 321 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 MIPEPQ99797 713 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 C17orf62Q9BQA9 187 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 SLC6A20Q9NP91 592 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 WHRNQ9P202 907 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 CTSFQ9UBX1 484 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 PLEKHB1Q9UF11 243 aaPredicted RBP12.37□□□□□ -0.43
TREX1-203ENST00000456089 TEX264Q9Y6I9 313 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 MAU2Q9Y6X3 613 aa12.37□□□□□ -0.43
TREX1-203ENST00000456089 ARHGEF33A8MVX0 844 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 EIF3FO00303 357 aaPredicted RBP12.36□□□□□ -0.43
TREX1-203ENST00000456089 RAD51CO43502 376 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 PRICKLE3O43900 615 aaPredicted RBP12.36□□□□□ -0.43
TREX1-203ENST00000456089 PSIP1O75475 530 aaKnown RBP12.36□□□□□ -0.43
TREX1-203ENST00000456089 ITGA3P26006 1051 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 CMPK1P30085 196 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 VSX2P58304 361 aaPredicted RBP12.36□□□□□ -0.43
TREX1-203ENST00000456089 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
TREX1-203ENST00000456089 FASTKQ14296 549 aaKnown RBP12.36□□□□□ -0.43
TREX1-203ENST00000456089 ARHGAP19Q14CB8 494 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 TEDDM1Q5T9Z0 273 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 CNTN4Q8IWV2 1026 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 CPNE9Q8IYJ1 553 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 PRSS58Q8IYP2 241 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 ZBED8Q8IZ13 594 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 MYO1HQ8N1T3 1032 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 HMGCLL1Q8TB92 370 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 CD200R1Q8TD46 325 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 DENND1AQ8TEH3 1009 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 PYROXD1Q8WU10 500 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 ZNF592Q92610 1267 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 DLG3Q92796 817 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 ZUFSPQ96AP4 578 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 IP6K3Q96PC2 410 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 SELENOSQ9BQE4 189 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 ABCF3Q9NUQ8 709 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
TREX1-203ENST00000456089 CDC23Q9UJX2 597 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 FBXL4Q9UKA2 621 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 NTNG1Q9Y2I2 539 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 CACNA1DQ01668 2161 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 CNTRLQ7Z7A1 2325 aa12.36□□□□□ -0.43
TREX1-203ENST00000456089 ZGRF1Q86YA3 2104 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 SCN2AQ99250 2005 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 SCN3AQ9NY46 2000 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
TREX1-203ENST00000456089 LOC105369274A0A096LPK9 316 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms