RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 AMER3Q8N944 861 aa22.03■■□□□ 1.12
PTPRA-208ENST00000455631 CA5BP1Q8WTZ4 195 aa22.03■■□□□ 1.12
PTPRA-208ENST00000455631 MMABQ96EY8 250 aaPredicted RBP22.03■■□□□ 1.12
PTPRA-208ENST00000455631 MKKSQ9NPJ1 570 aaPredicted RBP22.03■■□□□ 1.12
PTPRA-208ENST00000455631 INTUQ9ULD6 942 aa22.03■■□□□ 1.12
PTPRA-208ENST00000455631 KRT87PA6NCN2 255 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 H0YGG7 62 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 PJA2O43164 708 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 ARF3P61204 181 aaPredicted RBP22.02■■□□□ 1.12
PTPRA-208ENST00000455631 TMED2Q15363 201 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 FCRLBQ6BAA4 426 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 CAVIN1Q6NZI2 390 aaKnown RBP22.02■■□□□ 1.12
PTPRA-208ENST00000455631 ACBD4Q8NC06 268 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 AGAP11Q8TF27 550 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 RAD51AP1Q96B01 352 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 SDCCAG3Q96C92 435 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 MVB12AQ96EY5 273 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 IMMP1LQ96LU5 166 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 HES7Q9BYE0 225 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 ABHD10Q9NUJ1 306 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 MKL2Q9ULH7 1088 aa22.02■■□□□ 1.12
PTPRA-208ENST00000455631 RUVBL1Q9Y265 456 aaKnown RBP22.02■■□□□ 1.12
PTPRA-208ENST00000455631 GOLGA6L19H0YKK7 550 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 SEC24DO94855 1032 aaPredicted RBP22.01■■□□□ 1.11
PTPRA-208ENST00000455631 C8orf89P0DMQ9 161 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 PSMA3P25788 255 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 SYT16Q17RD7 645 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 CCSMST1Q4G0I0 132 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 AFTPHQ6ULP2 937 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 TMEM205Q6UW68 189 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 C3P1Q6ZMU1 363 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 KRT222Q8N1A0 295 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 CSNK1A1LQ8N752 337 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 OR2A1Q8NGT9 310 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 GSDMBQ8TAX9 411 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 SKA2Q8WVK7 121 aaPredicted RBP22.01■■□□□ 1.11
PTPRA-208ENST00000455631 SIGLEC12Q96PQ1 595 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 TGIF2Q9GZN2 237 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 ANKRD10Q9NXR5 420 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 TTC7AQ9ULT0 858 aaPredicted RBP22.01■■□□□ 1.11
PTPRA-208ENST00000455631 PCDHGB6Q9Y5F9 930 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 SCN2AQ99250 2005 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 NAV3Q8IVL0 2385 aa22.01■■□□□ 1.11
PTPRA-208ENST00000455631 OR2A25A4D2G3 310 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 ZNHIT1O43257 154 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 GOT2P00505 430 aaKnown RBP22■■□□□ 1.11
PTPRA-208ENST00000455631 EEF1DP29692 281 aaKnown RBP22■■□□□ 1.11
PTPRA-208ENST00000455631 SLC26A3P40879 764 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 EFNA3P52797 238 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 EMP3P54852 163 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 TUBA3CQ13748 450 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 TRIM14Q14142 442 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 NAA25Q14CX7 972 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 PARP6Q2NL67 630 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 HKDC1Q2TB90 917 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 BTBD16Q32M84 506 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 TUBA3EQ6PEY2 450 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 ZC3H7AQ8IWR0 971 aaKnown RBP22■■□□□ 1.11
PTPRA-208ENST00000455631 MDS2Q8NDY4 140 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 OR13J1Q8NGT2 312 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 PHF10Q8WUB8 498 aaKnown RBP22■■□□□ 1.11
PTPRA-208ENST00000455631 HDAC10Q969S8 669 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 FRMD6Q96NE9 622 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 DPH7Q9BTV6 452 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 CARD6Q9BX69 1037 aa22■■□□□ 1.11
PTPRA-208ENST00000455631 RUVBL2Q9Y230 463 aaKnown RBP22■■□□□ 1.11
PTPRA-208ENST00000455631 IGHV3-20A0A0C4DH32 117 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 VPS26AO75436 327 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 SLCO2B1O94956 709 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 METTL18O95568 372 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 TPM3P06753 285 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 HOXB4P17483 251 aaPredicted RBP21.99■■□□□ 1.11
PTPRA-208ENST00000455631 AOAHP28039 575 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 CMPK1P30085 196 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 ST13P50502 369 aaKnown RBP21.99■■□□□ 1.11
PTPRA-208ENST00000455631 HADHBP55084 474 aaKnown RBP21.99■■□□□ 1.11
PTPRA-208ENST00000455631 COPS2P61201 443 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 YBX1P67809 324 aaKnown RBP21.99■■□□□ 1.11
PTPRA-208ENST00000455631 HSF1Q00613 529 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 OR1C1Q15619 314 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 ACER2Q5QJU3 275 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 FBXO42Q6P3S6 717 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 HMGCLL1Q8TB92 370 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 METTL21AQ8WXB1 218 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 ZNF354BQ96LW1 612 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 TREX2Q9BQ50 279 aaPredicted RBP21.99■■□□□ 1.11
PTPRA-208ENST00000455631 ACAT2Q9BWD1 397 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 OSBPL8Q9BZF1 889 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 PPT2Q9UMR5 302 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 NFS1Q9Y697 457 aa21.99■■□□□ 1.11
PTPRA-208ENST00000455631 GTF3C1Q12789 2109 aa21.98■■□□□ 1.11
PTPRA-208ENST00000455631 A0A0A6YYC8 382 aaPredicted RBP21.98■■□□□ 1.11
PTPRA-208ENST00000455631 A0A1W2PPV9 198 aa21.98■■□□□ 1.11
PTPRA-208ENST00000455631 ASPDHA6ND91 283 aa21.98■■□□□ 1.11
PTPRA-208ENST00000455631 E9PLN8 166 aa21.98■■□□□ 1.11
PTPRA-208ENST00000455631 I3L1I5 382 aaPredicted RBP21.98■■□□□ 1.11
PTPRA-208ENST00000455631 C1orf105O95561 183 aa21.98■■□□□ 1.11
PTPRA-208ENST00000455631 TSPAN12O95859 305 aa21.98■■□□□ 1.11
PTPRA-208ENST00000455631 CD99P14209 185 aa21.98■■□□□ 1.11
PTPRA-208ENST00000455631 MAT1AQ00266 395 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms