RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SHISA6Q6ZSJ9 500 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 AGGF1Q8N302 714 aaeCLIP12.31□□□□□ -0.44
CHD3-206ENST00000452447 FAM26EQ8N5C1 309 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 FBXO15Q8NCQ5 510 aaPredicted RBP12.31□□□□□ -0.44
CHD3-206ENST00000452447 GALNT11Q8NCW6 608 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 GIMAP7Q8NHV1 300 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 ASB11Q8WXH4 323 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 CABS1Q96KC9 395 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 SPSB2Q99619 263 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 GPR21Q99679 349 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 PLCD4Q9BRC7 762 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
CHD3-206ENST00000452447 SLC6A20Q9NP91 592 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 IARS2Q9NSE4 1012 aaKnown RBP12.31□□□□□ -0.44
CHD3-206ENST00000452447 ABCF3Q9NUQ8 709 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 ANKMY1Q9P2S6 941 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 CTSFQ9UBX1 484 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 TAC3Q9UHF0 121 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 E7ENX8 843 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 H0YGG7 62 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 TTC4O95801 387 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 ITGA3P26006 1051 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 ARF3P61204 181 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 TAP2Q03519 686 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 INPP5JQ15735 1006 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 RBBP7Q16576 425 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 IRAK1BP1Q5VVH5 260 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 COX15Q7KZN9 410 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 TMEM151BQ8IW70 566 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 CPNE9Q8IYJ1 553 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 PPFIBP2Q8ND30 876 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 ZNF480Q8WV37 535 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 RERGQ96A58 199 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 NAT9Q9BTE0 207 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 ZNF552Q9H707 407 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 SEMA3GQ9NS98 782 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 ZNF282Q9UDV7 671 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 TRMT6Q9UJA5 497 aaKnown RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 FBXL4Q9UKA2 621 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 CDC14AQ9UNH5 594 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 MAP4K5Q9Y4K4 846 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 GFYI3L273 518 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 MASP2O00187 686 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 SMAPO00193 183 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 EIF3FO00303 357 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 DNALI1O14645 258 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 CARSP49589 748 aaKnown RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 SOX8P57073 446 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 ABATP80404 500 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 CRYMQ14894 314 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 PRAMEF13Q5VWM6 474 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 LRRC8EQ6NSJ5 796 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 UBE2R2Q712K3 238 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 PIWIL4Q7Z3Z4 852 aaKnown RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 ADCK2Q7Z695 626 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 PAQR7Q86WK9 346 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 ZADH2Q8N4Q0 377 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 DTWD1Q8N5C7 304 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 CSNK1A1LQ8N752 337 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 Q8NA96 180 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 CD200R1Q8TD46 325 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 MIEF2Q96C03 454 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 EBNA1BP2Q99848 306 aaKnown RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 AARSD1Q9BTE6 412 aaKnown RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 CRB3Q9BUF7 120 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 TAS2R13Q9NYV9 303 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 STOX2Q9P2F5 926 aaPredicted RBP12.3□□□□□ -0.44
CHD3-206ENST00000452447 B3GNT3Q9Y2A9 372 aa12.3□□□□□ -0.44
CHD3-206ENST00000452447 SCN3AQ9NY46 2000 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 IGKV1-8A0A0C4DH67 115 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 VSTM2BA6NLU5 285 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 SOCS6O14544 535 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 PRPF4O43172 522 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHD3-206ENST00000452447 EZRP15311 586 aaKnown RBP12.29□□□□□ -0.44
CHD3-206ENST00000452447 FBLP22087 321 aaKnown RBP12.29□□□□□ -0.44
CHD3-206ENST00000452447 GNLYP22749 145 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 SKIV2L2P42285 1042 aaKnown RBP12.29□□□□□ -0.44
CHD3-206ENST00000452447 RGS4P49798 205 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 EMP3P54852 163 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 DHX9Q08211 1270 aaKnown RBP12.29□□□□□ -0.44
CHD3-206ENST00000452447 PRTGQ2VWP7 1150 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 TUBB8Q3ZCM7 444 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 KIRREL2Q6UWL6 708 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 IGFL3Q6UXB1 125 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 CYHR1Q6ZMK1 362 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 PALM2Q8IXS6 379 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 PRSS58Q8IYP2 241 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 IQCKQ8N0W5 287 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 C2CD4AQ8NCU7 369 aaPredicted RBP12.29□□□□□ -0.44
CHD3-206ENST00000452447 STT3BQ8TCJ2 826 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 SLCO2A1Q92959 643 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 C10orf90Q96M02 699 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 NDNQ99608 321 aa12.29□□□□□ -0.44
CHD3-206ENST00000452447 YIPF2Q9BWQ6 316 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms