RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SNRNP200O75643 2136 aaKnown RBP16.43■□□□□ 0.22
PRPF40A-204ENST00000450303 J3QKU1 62 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 PHGDHO43175 533 aaKnown RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 CPNE3O75131 537 aaKnown RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 CREG1O75629 220 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 ALDOAP04075 364 aaKnown RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 C2P06681 752 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 CHRM5P08912 532 aaPredicted RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 COL6A2P12110 1019 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 UGT2B7P16662 529 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 HPDP32754 393 aaPredicted RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 SHMT2P34897 504 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 MAGEA12P43365 314 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 LCN10Q6JVE6 187 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 PAQR3Q6TCH7 311 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 SPESP1Q6UW49 350 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 TRABD2AQ86V40 505 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 CEP97Q8IW35 865 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 C2orf73Q8N5S3 287 aaPredicted RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 OR5K2Q8NHB8 316 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 MZB1Q8WU39 189 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 APOBEC4Q8WW27 367 aaKnown RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 ALKBH8Q96BT7 664 aaKnown RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 CLIP3Q96DZ5 547 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 OR2A14Q96R47 310 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 SMC6Q96SB8 1091 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 ADNPQ9H2P0 1102 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 FANCEQ9HB96 536 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 ZNF71Q9NQZ8 489 aaPredicted RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 MED16Q9Y2X0 877 aa16.42■□□□□ 0.22
PRPF40A-204ENST00000450303 A0A1W2PPM1 405 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 ISM1B1AKI9 464 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 MAP3K7O43318 606 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 GPC4O75487 556 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 RFPL1O75677 317 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 MPC1LP0DKB6 136 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 ZNF37AP17032 561 aaPredicted RBP16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 MDH1P40925 334 aaKnown RBP16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 TIAL1Q01085 375 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 KLC3Q6P597 504 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 CDHR3Q6ZTQ4 885 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 NEK10Q6ZWH5 1172 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 LCA5Q86VQ0 697 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 FAM20CQ8IXL6 584 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 SRRM1Q8IYB3 904 aaKnown RBP16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 CPNE9Q8IYJ1 553 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 SLC22A15Q8IZD6 547 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 MYO1HQ8N1T3 1032 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 OR8K5Q8NH50 307 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 FOPNLQ96NB1 174 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 TRIM4Q9C037 500 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 ACTL8Q9H568 366 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 FAM60AQ9NP50 221 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 GALPQ9UBC7 116 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 DCDC2Q9UHG0 476 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 ACTL7BQ9Y614 415 aa16.41■□□□□ 0.22
PRPF40A-204ENST00000450303 TLN1Q9Y490 2541 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 C21orf140B9A014 251 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 HCRTR1O43613 425 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 SLCO2B1O94956 709 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 GSTA1P08263 222 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 LTA4HP09960 611 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 SLC35E2BP0CK96 405 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 CCDC166P0CW27 439 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 PYGBP11216 843 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 KRT4P19013 534 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 CYP2A7P20853 494 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 PEBP1P30086 187 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 CCT5P48643 541 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 MAGOHP61326 146 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 ZNF460Q14592 562 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 ZIC1Q15915 447 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 FAM83EQ2M2I3 478 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 TSNAXIP1Q2TAA8 658 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 DEFB110Q30KQ9 67 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 CRTC2Q53ET0 693 aaPredicted RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 C19orf47Q8N9M1 422 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 FLVCR1-AS1Q8TAF5 88 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 SKA2Q8WVK7 121 aaPredicted RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 TLCD1Q96CP7 247 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 LINGO1Q96FE5 620 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 PDLIM5Q96HC4 596 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 IL17FQ96PD4 163 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 SLC30A3Q99726 388 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 CHST8Q9H2A9 424 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 NMRAL1Q9HBL8 299 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 PCMTD2Q9NV79 361 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 TSR3Q9UJK0 312 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 SERTAD3Q9UJW9 196 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 FARSAQ9Y285 508 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 PCDHGA6Q9Y5G7 932 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 KCNMB2Q9Y691 235 aa16.4■□□□□ 0.22
PRPF40A-204ENST00000450303 GOLGA8RI6L899 631 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 MEN1O00255 615 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 COPEO14579 308 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 GLRA3O75311 464 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 KLHL2O95198 593 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 KLK3P07288 261 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms