RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 PEBP1P30086 187 aaKnown RBP11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 IFI35P80217 286 aaPredicted RBP11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC14A2Q15849 920 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC18A3Q16572 532 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC25A35Q3KQZ1 300 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 EMC4Q5J8M3 183 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 FAM182AQ5T1J6 154 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 E4F1Q66K89 784 aaPredicted RBP11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 PLAG1Q6DJT9 500 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 ARHGAP11AQ6P4F7 1023 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 UNC5DQ6UXZ4 953 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 CAPN12Q6ZSI9 719 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 CRLF3Q8IUI8 442 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 TBC1D21Q8IYX1 336 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 POGLUT1Q8NBL1 392 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 SPATA22Q8NHS9 363 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 Q96MF0 132 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 ASB8Q9H765 288 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 C14orf105Q9NVL8 296 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 HACD3Q9P035 362 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 ZC3H7BQ9UGR2 993 aaKnown RBP11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 CDC14AQ9UNH5 594 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 SONP18583 2426 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 GABRR3A8MPY1 467 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 FFAR3O14843 346 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 STX7O15400 261 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 GPR42O15529 346 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 AKR1B10O60218 316 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 KDM1AO60341 852 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 NME2P1O60361 137 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC25A12O75746 678 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 SEC24DO94855 1032 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 CD48P09326 243 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 ATP1B2P14415 290 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 TFEBP19484 476 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 NME2P22392 152 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 UQCRC1P31930 480 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 GBE1Q04446 702 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 AP1B1Q10567 949 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC10A2Q12908 348 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 NOMO1Q15155 1222 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 MUM1Q2TAK8 710 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 LIX1LQ8IVB5 337 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 HEXDCQ8WVB3 486 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 METTL21AQ8WXB1 218 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 VPS37BQ9H9H4 285 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 STOX2Q9P2F5 926 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 LCMT1Q9UIC8 334 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 INTUQ9ULD6 942 aa11.88□□□□□ -0.51
AC004540.1-204ENST00000449537 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 CFAP99D6REC4 459 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 SYT5O00445 386 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 PDE9AO76083 593 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 C8orf89P0DMQ9 161 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 PPIDQ08752 370 aaKnown RBP11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 PTPRCAPQ14761 206 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 SPA17Q15506 151 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 GXYLT1Q4G148 440 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 ZNF658BQ4V348 819 aaPredicted RBP11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 ZNF571Q7Z3V5 609 aaPredicted RBP11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 GLT6D1Q7Z4J2 308 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 CXorf67Q86X51 503 aaPredicted RBP11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 LRRC8AQ8IWT6 810 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 VWA5B2Q8N398 1253 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC25A41Q8N5S1 370 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 FAM71BQ8TC56 605 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 BLOC1S5Q8TDH9 187 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC22A18Q96BI1 424 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 CALR3Q96L12 384 aaKnown RBP11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 NPAS2Q99743 824 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 TTYH2Q9BSA4 534 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 TGIF2Q9GZN2 237 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 MKKSQ9NPJ1 570 aaPredicted RBP11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 Q9UFV3 132 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 PLAGL1Q9UM63 463 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 ZKSCAN5Q9Y2L8 839 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 ZANQ9Y493 2812 aa11.87□□□□□ -0.51
AC004540.1-204ENST00000449537 IGHV3-20A0A0C4DH32 117 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 LOC285095A0A1B0GVY8 99 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 ESPNB1AK53 854 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 PRPF4O43172 522 aaKnown RBP eCLIP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 HS6ST1O60243 411 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 MAN1A2O60476 641 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 SRP72O76094 671 aaKnown RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 AP2A1O95782 977 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 FTLP02792 175 aaPredicted RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 EIF2S1P05198 315 aaKnown RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 GLI4P10075 376 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 BMP7P18075 431 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 ACVR2AP27037 513 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 PIGHQ14442 188 aaPredicted RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 SF1Q15637 639 aaKnown RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 ASTE1Q2TB18 679 aaPredicted RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 CMPK2Q5EBM0 449 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 SIRPB2Q5JXA9 342 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms