RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TSTD2Q5T7W7 516 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DPPA4Q7L190 304 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRUNE1Q86TP1 453 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 APOLD1Q96LR9 279 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF354BQ96LW1 612 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 SAP130Q9H0E3 1048 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 WASH6PQ9NQA3 447 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 C3orf18Q9UK00 162 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 NXT1Q9UKK6 140 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 VWA7Q9Y334 891 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 MYOFQ9NZM1 2061 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TEX51A0A1B0GUA7 166 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRIM64A6NGJ6 449 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 IQCF5A8MTL0 148 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 NPIPA5E9PKD4 350 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PNLIPRP1P54315 467 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TAS2R40P59535 323 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TUBB8Q3ZCM7 444 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 GRTP1Q5TC63 336 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 GDF7Q7Z4P5 450 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 KBTBD2Q8IY47 623 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 KRT222Q8N1A0 295 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 BCORP1Q8N888 145 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 BOLLQ8N9W6 283 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PHF21AQ96BD5 680 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TADA1Q96BN2 335 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CPNE1Q99829 537 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 SYBUQ9NX95 663 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 NPIPA1Q9UND3 350 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 SDK2Q58EX2 2172 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 GTF3C1Q12789 2109 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DVL2O14641 736 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 SMAD6O43541 496 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 CDH16O75309 829 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 SEC22BO75396 215 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 ARHGEF15O94989 841 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 CPSF4O95639 269 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 EPHA8P29322 1005 aaPredicted RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 LTBRP36941 435 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 RXRGP48443 463 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAN2A2P49641 1150 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAPRE2Q15555 327 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 CA9Q16790 459 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 GALNTL6Q49A17 601 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRAF7Q6Q0C0 670 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 KYAT3Q6YP21 454 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRMT10CQ7L0Y3 403 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC46A3Q7Z3Q1 461 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC22A16Q86VW1 577 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 ANKRD7Q92527 254 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 DAZLQ92904 295 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZBTB9Q96C00 473 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR1F2PQ96R84 312 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 SMAD5Q99717 465 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 AARSD1Q9BTE6 412 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 CRISPLD1Q9H336 500 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 C10orf88Q9H8K7 445 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 NANSQ9NR45 359 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 MRGBPQ9NV56 204 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 DTLQ9NZJ0 730 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 KRBA1A5PL33 1030 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 DRGXA6NNA5 263 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 SCDO00767 359 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 GLRA3O75311 464 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 AP2A1O95782 977 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 HNRNPLP14866 589 aaKnown RBP eCLIP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 OGNP20774 298 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 MRPS25P82663 173 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 INAQ16352 499 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 CPSF6Q16630 551 aaKnown RBP eCLIP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 PNCKQ6P2M8 343 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 GK5Q6ZS86 529 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF567Q8N184 647 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 ACVR1CQ8NER5 493 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 NUDT8Q8WV74 236 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 DPF1Q92782 380 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 PHF21BQ96EK2 531 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 FRMD6Q96NE9 622 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 CD180Q99467 661 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 EPN3Q9H201 632 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 ELL3Q9HB65 397 aaPredicted RBP5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 EQTNQ9NQ60 294 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 TAC3Q9UHF0 121 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 KCTD3Q9Y597 815 aa5.46□□□□□ -1.53
CDC42BPA-209ENST00000448940 IGHV1OR15-9A0A0B4J2B8 117 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 GOLGA8RI6L899 631 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ULK1O75385 1050 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 STK17BO94768 372 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAD52P43351 418 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLCN7P51798 805 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLA2G16P53816 162 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 EEFSECP57772 596 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ABATP80404 500 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 MRPS35P82673 323 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CDK3Q00526 305 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF528Q3MIS6 628 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 C9orf64Q5T6V5 341 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 LIPIQ6XZB0 460 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 COG1Q8WTW3 980 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 MAML1Q92585 1016 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms