RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ITGA2P17301 1181 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 DUSP7Q16829 419 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 ZRANB3Q5FWF4 1079 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 SDHAF4Q5VUM1 108 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 RGL4Q8IZJ4 473 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 TMEM132CQ8N3T6 1108 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 OR52E4Q8NGH9 312 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 PPTC7Q8NI37 304 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 CCDC32Q9BV29 185 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 AASDHPPTQ9NRN7 309 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 DLGAP4Q9Y2H0 992 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 CCDC88CQ9P219 2028 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 NINQ8N4C6 2090 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 DNAJC25-GNG10A0A024R161 153 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 UPK3BL1B0FP48 263 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 UPK3BL2E5RIL1 263 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 TEX28O15482 410 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 RGS14O43566 566 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 SCO1O75880 301 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 LHX1P48742 406 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 ZNF235Q14590 738 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 TAPT1Q6NXT6 567 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 GLT6D1Q7Z4J2 308 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 HOMEZQ8IX15 550 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 ANKK1Q8NFD2 765 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 LRTM1Q9HBL6 345 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 TMEM184CQ9NVA4 438 aa13.56□□□□□ -0.24
VPS52-212ENST00000445902 A0A0B4J293 547 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 EFCAB10A6NFE3 127 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 HAS3O00219 553 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 CCNDBP1O95273 360 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 FGF1P05230 155 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 HMBSP08397 361 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 BCKDHAP12694 445 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 S100A3P33764 101 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 MLLT6P55198 1093 aaPredicted RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 MXD1Q05195 221 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 ZNF79Q15937 498 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 RASAL3Q86YV0 1011 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 LPPQ93052 612 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 RNF31Q96EP0 1072 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 HRASLS5Q96KN8 279 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 PITX2Q99697 317 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 TMEM45AQ9NWC5 275 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 RBPJLQ9UBG7 517 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 SATB2Q9UPW6 733 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 PTCH2Q9Y6C5 1203 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 SMIM30A4D0T7 59 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 OTCP00480 354 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 POU2F1P14859 743 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 TNFRSF1BP20333 461 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 TACR1P25103 407 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 SSTR4P31391 388 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 UQCRC1P31930 480 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 GNPDA1P46926 289 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 EIF4EBP2Q13542 120 aaPredicted RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 EFR3AQ14156 821 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 NFE2Q16621 373 aaPredicted RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 INO80DQ53TQ3 878 aaPredicted RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 C10orf62Q5T681 223 aaPredicted RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 GLCCI1Q86VQ1 547 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 SLC44A2Q8IWA5 706 aaPredicted RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 FAM109AQ8N4B1 249 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 EFHBQ8N7U6 833 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 ASB15Q8WXK1 588 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 EGFL8Q99944 293 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 BARHL1Q9BZE3 327 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 MKRN2Q9H000 416 aaKnown RBP13.55□□□□□ -0.24
VPS52-212ENST00000445902 RERGLQ9H628 205 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 SNTG1Q9NSN8 517 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 RLIMQ9NVW2 624 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 TEKT2Q9UIF3 430 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 MYO16Q9Y6X6 1858 aa13.55□□□□□ -0.24
VPS52-212ENST00000445902 A0A1W2PQH9 124 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 CCDC182A6NF36 153 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 MRPS14O60783 128 aaKnown RBP13.54□□□□□ -0.24
VPS52-212ENST00000445902 ZNF780AO75290 641 aaPredicted RBP13.54□□□□□ -0.24
VPS52-212ENST00000445902 ULK1O75385 1050 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 GPX5O75715 221 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 KRT6AP02538 564 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 KRT6BP04259 564 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 CCNYL3P0C7X3 344 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 RPS19P39019 145 aaKnown RBP13.54□□□□□ -0.24
VPS52-212ENST00000445902 ETV6P41212 452 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 ZXDBP98169 803 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 ZNF605Q86T29 641 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 LRRTM3Q86VH5 581 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 CACTIN-AS1Q8N1I8 211 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 MDGA1Q8NFP4 955 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 IGSF8Q969P0 613 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 OMA1Q96E52 524 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 FEVQ99581 238 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 UCK2Q9BZX2 261 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 POLR1EQ9GZS1 481 aaKnown RBP13.54□□□□□ -0.24
VPS52-212ENST00000445902 NARFLQ9H6Q4 476 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 ELOVL2Q9NXB9 296 aa13.54□□□□□ -0.24
VPS52-212ENST00000445902 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms