RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 AGTR2P50052 363 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 HNMTP50135 292 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 CDKL4Q5MAI5 379 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 BEND6Q5SZJ8 279 aaPredicted RBP15.38■□□□□ 0.05
USP39-205ENST00000442708 SULT1C3Q6IMI6 304 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 CAPN13Q6MZZ7 669 aaPredicted RBP15.38■□□□□ 0.05
USP39-205ENST00000442708 FBXO42Q6P3S6 717 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 LCTLQ6UWM7 567 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 CEACAM20Q6UY09 585 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 THOC6Q86W42 341 aaKnown RBP15.38■□□□□ 0.05
USP39-205ENST00000442708 IQCKQ8N0W5 287 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 PRAP1Q96NZ9 151 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 TMEM109Q9BVC6 243 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 B3GNT4Q9C0J1 378 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 SPRTNQ9H040 489 aaPredicted RBP15.38■□□□□ 0.05
USP39-205ENST00000442708 NUDT4Q9NZJ9 180 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 RARRES3Q9UL19 164 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 SLC22A14Q9Y267 594 aa15.38■□□□□ 0.05
USP39-205ENST00000442708 LOC105369274A0A096LPK9 316 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 LOC102723532A0A0G2JNH3 316 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 TEX51A0A1B0GUA7 166 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 CCDC151A5D8V7 595 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 LRRC14BA6NHZ5 514 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 MAP2K7O14733 419 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 HAT1O14929 419 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 CCNDBP1O95273 360 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 MT-ND3P03897 115 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 CCND1P24385 295 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 HSPA7P48741 367 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 ABATP80404 500 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 ZNF844Q08AG5 666 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 IFFO1Q0D2I5 559 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP39-205ENST00000442708 FRMPD2BQ6IN97 320 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 C16orf46Q6P387 395 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 KLC3Q6P597 504 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 TIPARPQ7Z3E1 657 aaKnown RBP15.37■□□□□ 0.05
USP39-205ENST00000442708 PPP1R3BQ86XI6 285 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 PLD3Q8IV08 490 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 MCATQ8IVS2 390 aaKnown RBP15.37■□□□□ 0.05
USP39-205ENST00000442708 OR4N4Q8N0Y3 316 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 ACMSDQ8TDX5 336 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 ZCCHC14Q8WYQ9 949 aaKnown RBP15.37■□□□□ 0.05
USP39-205ENST00000442708 FGF11Q92914 225 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 NEIL2Q969S2 332 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 SCYL1Q96KG9 808 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 TSNARE1Q96NA8 513 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 ASPSCR1Q9BZE9 553 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 PCBD2Q9H0N5 130 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 WWOXQ9NZC7 414 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 TMEM216Q9P0N5 145 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 XPR1Q9UBH6 696 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 LGALS13Q9UHV8 139 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 RALYQ9UKM9 306 aaKnown RBP15.37■□□□□ 0.05
USP39-205ENST00000442708 ACSL6Q9UKU0 697 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 PLCL2Q9UPR0 1127 aa15.37■□□□□ 0.05
USP39-205ENST00000442708 FER1L5A0AVI2 2057 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 CCDC189A1A4V9 331 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 TK2O00142 265 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 ZZEF1O43149 2961 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 KLK8O60259 260 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 WDR47O94967 919 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 KRT15P19012 456 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 CSNK1G2P78368 415 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 TGIF1Q15583 401 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 TSNAXIP1Q2TAA8 658 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 CATSPEREQ5SY80 951 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 TMEM164Q5U3C3 297 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 RNF44Q7L0R7 432 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 C17orf64Q86WR6 236 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 KDF1Q8NAX2 398 aaPredicted RBP15.36■□□□□ 0.05
USP39-205ENST00000442708 SLC38A9Q8NBW4 561 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 SNIP1Q8TAD8 396 aaKnown RBP15.36■□□□□ 0.05
USP39-205ENST00000442708 UBTD2Q8WUN7 234 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 ZIM3Q96PE6 472 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 TEFMQ96QE5 360 aaKnown RBP15.36■□□□□ 0.05
USP39-205ENST00000442708 ZPBPQ9BS86 351 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 HAUS8Q9BT25 410 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 ROPN1BQ9BZX4 212 aaPredicted RBP15.36■□□□□ 0.05
USP39-205ENST00000442708 SPNS1Q9H2V7 528 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 ROPN1Q9HAT0 212 aaPredicted RBP15.36■□□□□ 0.05
USP39-205ENST00000442708 CPSF2Q9P2I0 782 aaKnown RBP15.36■□□□□ 0.05
USP39-205ENST00000442708 ANKMY1Q9P2S6 941 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 EMCNQ9ULC0 261 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 SNX7Q9UNH6 387 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 RAXQ9Y2V3 346 aa15.36■□□□□ 0.05
USP39-205ENST00000442708 AHCTF1Q8WYP5 2266 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 A0A0J9YVX5 310 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 MAP3K7O43318 606 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 PRAMEF4O60810 478 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 STK17BO94768 372 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 KIAA0754O94854 1291 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 DLGAP3O95886 979 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 S100BP04271 92 aaPredicted RBP15.35■□□□□ 0.05
USP39-205ENST00000442708 NTRK1P04629 796 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 RBP1P09455 135 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 EPORP19235 508 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 ITGA1P56199 1179 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 MEF2AQ02078 507 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms