RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CTAGE4Q8IX94 777 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 DMGDHQ9UI17 866 aaKnown RBP22.64■■□□□ 1.21
VARS-217ENST00000440048 IKZF3Q9UKT9 509 aa22.64■■□□□ 1.21
VARS-217ENST00000440048 LOC105369274A0A096LPK9 316 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 LOC102723532A0A0G2JNH3 316 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 C9J4A7 227 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 HIST1H2AGP0C0S8 130 aaPredicted RBP22.63■■□□□ 1.21
VARS-217ENST00000440048 SFTPCP11686 197 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 HIST1H2ADP20671 130 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 ARSFP54793 590 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 TBPL1P62380 186 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 DCDP81605 110 aaKnown RBP22.63■■□□□ 1.21
VARS-217ENST00000440048 IL10RAQ13651 578 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 GRM7Q14831 915 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 NCF4Q15080 339 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 UGT8Q16880 541 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 WASHC2DQ5SRD0 308 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 AGTRAPQ6RW13 159 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 ZNF605Q86T29 641 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 CEP97Q8IW35 865 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 OR4N4Q8N0Y3 316 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 NKAPQ8N5F7 415 aaKnown RBP22.63■■□□□ 1.21
VARS-217ENST00000440048 HIST1H2AHQ96KK5 128 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 CPNE1Q99829 537 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 HIST1H2AJQ99878 128 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 ZFYVE21Q9BQ24 234 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 H2AFJQ9BTM1 129 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 CCDC177Q9NQR7 707 aaPredicted RBP22.63■■□□□ 1.21
VARS-217ENST00000440048 TXNDC16Q9P2K2 825 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 SNX7Q9UNH6 387 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 POLHQ9Y253 713 aa22.63■■□□□ 1.21
VARS-217ENST00000440048 MTO1Q9Y2Z2 717 aaKnown RBP22.63■■□□□ 1.21
VARS-217ENST00000440048 FITM1A5D6W6 292 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 ATXN8OSP0DMR3 200 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 ALAS2P22557 587 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 GP5P40197 560 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 POLE2P56282 527 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 FAM69BQ5VUD6 431 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 TTLL10Q6ZVT0 673 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 CTAGE3PQ8IX95 158 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 TTC29Q8NA56 475 aaPredicted RBP22.62■■□□□ 1.21
VARS-217ENST00000440048 FBF1Q8TES7 1133 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 APOBEC4Q8WW27 367 aaKnown RBP22.62■■□□□ 1.21
VARS-217ENST00000440048 RBBP8Q99708 897 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 C17orf62Q9BQA9 187 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 TRIM54Q9BYV2 358 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 ATG10Q9H0Y0 220 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 POPDC3Q9HBV1 291 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 CUTCQ9NTM9 273 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 CUEDC1Q9NWM3 386 aaPredicted RBP22.62■■□□□ 1.21
VARS-217ENST00000440048 ARL15Q9NXU5 204 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 UTP6Q9NYH9 597 aaKnown RBP22.62■■□□□ 1.21
VARS-217ENST00000440048 TCFL5Q9UL49 500 aa22.62■■□□□ 1.21
VARS-217ENST00000440048 AP1S2P56377 157 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 POU4F1Q01851 419 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 NAE1Q13564 534 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 KBTBD12Q3ZCT8 623 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 NKAIN1Q4KMZ8 207 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 YOD1Q5VVQ6 348 aaPredicted RBP22.61■■□□□ 1.21
VARS-217ENST00000440048 PRAMEF13Q5VWM6 474 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 MLIPQ5VWP3 458 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 SBSNQ6UWP8 590 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 ANKRD49Q8WVL7 239 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 PCBD2Q9H0N5 130 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 SYNPO2LQ9H987 977 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 GEMIN8Q9NWZ8 242 aaKnown RBP22.61■■□□□ 1.21
VARS-217ENST00000440048 NDOR1Q9UHB4 597 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 KCNMB2Q9Y691 235 aa22.61■■□□□ 1.21
VARS-217ENST00000440048 A0A1B0GX78 115 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 PABPN1LA6NDY0 278 aaKnown RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 H0YGG7 62 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 CDC7O00311 574 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 DSCR3O14972 297 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 EIF2S1P05198 315 aaKnown RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 ENO2P09104 434 aaPredicted RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 ITGAXP20702 1163 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 STX2P32856 288 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 SLC12A2P55011 1212 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 ARF3P61204 181 aaPredicted RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 SLC9A5Q14940 896 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 ZXDCQ2QGD7 858 aaPredicted RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 ADCK2Q7Z695 626 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 PPM1NQ8N819 430 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 ANKRD7Q92527 254 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 ALKBH8Q96BT7 664 aaKnown RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 GPR22Q99680 433 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 DHRS4Q9BTZ2 278 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 SGPP1Q9BX95 441 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 ADNPQ9H2P0 1102 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 CAB39LQ9H9S4 337 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 GPAMQ9HCL2 828 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 SLC22A11Q9NSA0 550 aa22.6■■□□□ 1.21
VARS-217ENST00000440048 IFT80Q9P2H3 777 aaPredicted RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 GPN3Q9UHW5 284 aaPredicted RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 NOVA2Q9UNW9 492 aaKnown RBP22.6■■□□□ 1.21
VARS-217ENST00000440048 HYKKA2RU49 373 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 NPEPPSL1A6NEC2 478 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 H7BY64 318 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 HAT1O14929 419 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 WISP3O95389 354 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms