RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PSMG3-AS1Q96PY0 264 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 PLCD4Q9BRC7 762 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 YIPF2Q9BWQ6 316 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 KLHL42Q9P2K6 505 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 COMMD10Q9Y6G5 202 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 ZCWPW2A0A1B0GU75 182 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 VSTM2BA6NLU5 285 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 H0YGG7 62 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 MAP2K7O14733 419 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 ZBTB14O43829 449 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 SLC16A8O95907 504 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 F7P08709 466 aaPredicted RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 EZRP15311 586 aaKnown RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 GLRBP48167 497 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 ARF3P61204 181 aaPredicted RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 YBX1P67809 324 aaKnown RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 PRDX1Q06830 199 aaKnown RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 KLC1Q07866 573 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 MRPL49Q13405 166 aaKnown RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 PPP1R7Q15435 360 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 ICE2Q659A1 982 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 KIRREL2Q6UWL6 708 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 PPIL6Q8IXY8 311 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 CSNK1A1LQ8N752 337 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 PPFIBP2Q8ND30 876 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 GABPB2Q8TAK5 448 aaPredicted RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 PRR7Q8TB68 274 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 SSC4DQ8WTU2 575 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 INPP5DQ92835 1189 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 C19orf60Q96EN9 201 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 SLC30A3Q99726 388 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 WDR77Q9BQA1 342 aaPredicted RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 FAM167BQ9BTA0 163 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 LHPPQ9H008 270 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 EPS8L2Q9H6S3 715 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 STOX2Q9P2F5 926 aaPredicted RBP17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 SHANK1Q9Y566 2161 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 LRRK2Q5S007 2527 aa17.6■□□□□ 0.41
AC004540.1-201ENST00000439120 SMAPO00193 183 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 MED26O95402 600 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 ANXA5P08758 320 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 ZGLP1P0C6A0 271 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 MPC1LP0DKB6 136 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 ACPPP15309 386 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 FNTAP49354 379 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 ELOAQ14241 798 aaKnown RBP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 NR6A1Q15406 480 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 EIF2S3LQ2VIR3 472 aaKnown RBP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 FBXO42Q6P3S6 717 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 PAQR7Q86WK9 346 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 NAT8LQ8N9F0 302 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 FBXO15Q8NCQ5 510 aaPredicted RBP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 OR11G2Q8NGC1 345 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 GIMAP7Q8NHV1 300 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 ZNF480Q8WV37 535 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 THOC3Q96J01 351 aaKnown RBP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 C10orf90Q96M02 699 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 OSBPL9Q96SU4 736 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 GPR21Q99679 349 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 EBNA1BP2Q99848 306 aaKnown RBP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 ZBTB20Q9HC78 741 aaPredicted RBP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 ASF1BQ9NVP2 202 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 TRPC4Q9UBN4 977 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 PCYOX1Q9UHG3 505 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 C3orf18Q9UK00 162 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 FBXO5Q9UKT4 447 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 DHRS7Q9Y394 339 aa17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 COPG1Q9Y678 874 aaKnown RBP17.59■□□□□ 0.41
AC004540.1-201ENST00000439120 TXNDC9O14530 226 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 CXCR2P25025 360 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 EMP3P54852 163 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 ABATP80404 500 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 PTK6Q13882 451 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 HIF1AQ16665 826 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 PRTGQ2VWP7 1150 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 HSP90AA5PQ58FG0 334 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 LRRC8EQ6NSJ5 796 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 UGT3A1Q6NUS8 523 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 ZNF549Q6P9A3 640 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 Q6ZS92 163 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 UBE2R2Q712K3 238 aaPredicted RBP17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 KCNMB4Q86W47 210 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 CPNE9Q8IYJ1 553 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 SLC35F6Q8N357 371 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 ACTRT1Q8TDG2 376 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 ASB11Q8WXH4 323 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 MVB12AQ96EY5 273 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 MMABQ96EY8 250 aaPredicted RBP17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 AGPAT4Q9NRZ5 378 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 IARS2Q9NSE4 1012 aaKnown RBP17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 CUEDC1Q9NWM3 386 aaPredicted RBP17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 ASIC3Q9UHC3 531 aa17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 TRMT6Q9UJA5 497 aaKnown RBP17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 RUVBL1Q9Y265 456 aaKnown RBP17.58■□□□□ 0.4
AC004540.1-201ENST00000439120 E7ENX8 843 aa17.57■□□□□ 0.4
AC004540.1-201ENST00000439120 ZSCAN12O43309 604 aa17.57■□□□□ 0.4
AC004540.1-201ENST00000439120 HAUS5O94927 633 aa17.57■□□□□ 0.4
AC004540.1-201ENST00000439120 HPP00738 406 aa17.57■□□□□ 0.4
AC004540.1-201ENST00000439120 UQCRHP07919 91 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms